[yt-svn] Build failed in Jenkins: py2.7-yt_analysis-dev #216
admin at shiningpanda.com
admin at shiningpanda.com
Thu Feb 7 12:21:16 PST 2013
See <https://jenkins.shiningpanda-ci.com/yt-project/job/py2.7-yt_analysis-dev/216/changes>
Changes:
[Matthew Turk <matthewturk at gmail.com>] Merged in samskillman/yt (pull request #383)
AMRKDTree rewrite, Volume Rendering Upgrades
[Sam Skillman <samskillman at gmail.com>] Fixing up some transfer function/annotated image showing. Also fixing color
values for map_to_colormap (should always be between 0..1).
[Sam Skillman <samskillman at gmail.com>] Adding AMRKDTree unit tests, utilizing load_uniform_grid and refine_amr to generate a fake AMR dataset.
[Sam Skillman <samskillman at gmail.com>] Merging in fixes from another head.
[Sam Skillman <samskillman at gmail.com>] Merging in from tip.
[Sam Skillman <samskillman at gmail.com>] Fixing neighbor finding with AMRKDTree
[Sam Skillman <samskillman at gmail.com>] More fixes to transfer functions, and restoring more functionality to the new
AMRKDTree in terms of calculating total volume/cells. Re-linking TFs to mimic
old behavior.
[Sam Skillman <samskillman at gmail.com>] Getting rid of some usages of prints, and fixing the perspective renders integration
due to a miscalculated offset when using 4 channels.
[Sam Skillman <samskillman at gmail.com>] Bugfixes for more of the cameras. Perspective still not working
[Sam Skillman <sam.skillman at gmail.com>] First pass at combining parallel AMRKDTrees. Not very efficient, but sometimes
necessary for streamlines.
[Sam Skillman <sam.skillman at gmail.com>] A few more fixes
[Sam Skillman <sam.skillman at gmail.com>] First round of edits.
[Sam Skillman <sam.skillman at gmail.com>] Fixing broken API for storing, loading kd bricks. Also fixes for the annotation of the images
[Sam Skillman <sam.skillman at gmail.com>] Bugfixes, restore streamline functionality
[Sam Skillman <sam.skillman at gmail.com>] Merging from main into kd refactor/mpi-opaque work. Includes a no-op merge of
the amr_kdtree.py since it has been re-written.
[Sam Skillman <sam.skillman at gmail.com>] Removed tag mpi-opaque
[Sam Skillman <sam.skillman at gmail.com>] Make the comm size and rank keywords.
[Sam Skillman <sam.skillman at gmail.com>] Adding a find_node function, which given a starting node and position, will find the brick containing that position.
[Sam Skillman <sam.skillman at gmail.com>] cleaning up trailing whitespace
[Sam Skillman <sam.skillman at gmail.com>] na -> np
[Sam Skillman <sam.skillman at gmail.com>] Bugfix. Without this, once down to one grid, it would return even if it didn't completely cover the node.
[Sam Skillman <sam.skillman at gmail.com>] Working on parallel image reduction.
[Sam Skillman <sam.skillman at gmail.com>] Subdomains now work correctly. I think the check to make sure a valid split was found can now be removed.'
[Sam Skillman <sam.skillman at gmail.com>] Merging in kd refactor work into mpi-opaque.
[Sam Skillman <sam.skillman at gmail.com>] If kdtree_get_choices fails, the node is invalid.
[Sam Skillman <sam.skillman at gmail.com>] Removing print statements
[Sam Skillman <sam.skillman at gmail.com>] Implment geometrical splitting of grids based on longest axis. May be fragile to non-cubical cells.
[Sam Skillman <sam.skillman at gmail.com>] Adding back in scale multiplier in map_to_colormap
[Sam Skillman <sam.skillman at gmail.com>] Need to return the image. Later should revisit memory usage/duplication.
[Sam Skillman <sam.skillman at gmail.com>] Merging new kd work in with alpha channel work. This compiles/runs but images arent generated correctly yet due to the way alpha is handled in the imshow/write_bitmap call.
[Sam Skillman <sam.skillman at gmail.com>] Implementing parallel build and image reduction. Still seeing some issues with non-power of 2 in terms of some regions showing up lighter/darker. This will probably get solved with the alpha channel coming back.
[Sam Skillman <sam.skillman at gmail.com>] Merging from main.
[Sam Skillman <sam.skillman at gmail.com>] Fixing some long lines.
[Sam Skillman <sam.skillman at gmail.com>] Parallel build seems to be partitioning correctly. Now just need to write the reduction techniques and modify the traversals to deal with nodes that neither have children nor own a grid.
[Sam Skillman <sam.skillman at gmail.com>] Before moving to a while loop instead of recursive calls.
[Sam Skillman <sam.skillman at gmail.com>] MosaicCamera uses dynamic parallel objects
[Sam Skillman <sam.skillman at gmail.com>] Merging
[Sam Skillman <sam.skillman at gmail.com>] remove an argument
[Sam Skillman <sam.skillman at gmail.com>] Merging yt into my rendering development head
[Sam Skillman <sam.skillman at gmail.com>] Merging
[Sam Skillman <sam.skillman at gmail.com>] Fixing some mpl calls in the interactive camera.
[Sam Skillman <sam.skillman at gmail.com>] Intermediate work on the mosaic camera
[Sam Skillman <sam.skillman at gmail.com>] re-implementing the MosaicCamera
[Sam Skillman <sam.skillman at gmail.com>] Adding a 4th (alpha) channel to the rgba that is used in volume renderings. This allows for more flexibility in integrating the various fields along the ray. In particular, it allows for MPI-parallel (to go along with the OpenMP) opaque renders. Also restoring the proper movement when steady_north is used, which may have gotten mixed up in a prior merge. Currently I've only tested the ColorTransferFunction, and I suspect other cameras/TFs will need to be updated now that rgba[4] is assumed in some places.
[Sam Skillman <sam.skillman at gmail.com>] Updating hgignore to yt/utilities/lib from /_amr_utils
[Sam Skillman <sam.skillman at gmail.com>] Make the image an arg rather than kwarg
[Sam Skillman <sam.skillman at gmail.com>] Working on annotated volume renders, and the ability to show them interactively when using ipython with a compatible matplotlib backend. This needs cleaning up.
[Sam Skillman <sam.skillman at gmail.com>] Fixing a bug in the interactive camera. Also changing the way transfer functions are displayed with the interactive camera. If people like this, we should change this for the normal TF.plot() as well.
[Sam Skillman <sam.skillman at gmail.com>] Adding min_ and max_level kwargs for AMRKDTree. This removes some of the defensive programming checks in AMRKDTree.traverse, but I think this is okay, and similar to what we have set up in the old implementation. This significantly speeds up tree build and rendering for nested sims.
[Sam Skillman <sam.skillman at gmail.com>] Moving bare functions from amr_kdtree.py to amr_kdtools.py
[Sam Skillman <sam.skillman at gmail.com>] Cleaning
[Sam Skillman <sam.skillman at gmail.com>] Rewrite of the AMRKDTree, which simplifies the construction, and will allow for arbitrary grid collections in the future. Still is not at feature parity of the old AMRKDTree, but this is a good starting point.
------------------------------------------
[...truncated 89 lines...]
building extension "yt.utilities.lib.Interpolators" sources
building extension "yt.utilities.lib.marching_cubes" sources
building extension "yt.utilities.lib.misc_utilities" sources
building extension "yt.utilities.lib.Octree" sources
building extension "yt.utilities.lib.png_writer" sources
building extension "yt.utilities.lib.PointsInVolume" sources
building extension "yt.utilities.lib.QuadTree" sources
building extension "yt.utilities.lib.RayIntegrators" sources
building extension "yt.utilities.lib.VolumeIntegrator" sources
building extension "yt.utilities.lib.grid_traversal" sources
cythonc:> yt/utilities/lib/grid_traversal.c
building extension "yt.utilities.lib.GridTree" sources
building extension "yt.utilities.data_point_utilities" sources
building extension "yt.utilities.hdf5_light_reader" sources
building extension "yt.utilities.libconfig_wrapper" sources
building extension "yt.visualization._MPL" sources
building data_files sources
build_src: building npy-pkg config files
writing yt.egg-info/PKG-INFO
writing top-level names to yt.egg-info/top_level.txt
writing dependency_links to yt.egg-info/dependency_links.txt
writing entry points to yt.egg-info/entry_points.txt
reading manifest file 'yt.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'yt.egg-info/SOURCES.txt'
running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
building 'yt.utilities.lib.geometry_utils' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
compile options: '-I/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/slave/yt-x86_64/include/python2.7 -c'
extra options: '-fopenmp'
gcc: yt/utilities/lib/geometry_utils.c
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1532: warning: ‘_import_array’ defined but not used
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:226: warning: ‘_import_umath’ defined but not used
gcc -pthread -shared -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ build/temp.linux-x86_64-2.7/yt/utilities/lib/geometry_utils.o -lm -o yt/utilities/lib/geometry_utils.so -fopenmp
building 'yt.utilities.lib.grid_traversal' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
compile options: '-Iyt/utilities/lib/ -I/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/slave/yt-x86_64/include/python2.7 -c'
extra options: '-fopenmp'
gcc: yt/utilities/lib/healpix_vec2pix_nest.c
yt/utilities/lib/healpix_vec2pix_nest.c: In function ‘vec2pix_nest’:
yt/utilities/lib/healpix_vec2pix_nest.c:56: warning: unused variable ‘pi’
gcc: yt/utilities/lib/kdtree.c
In file included from /home/slave/yt-x86_64/include/python2.7/Python.h:8,
from yt/utilities/lib/kdtree.h:29,
from yt/utilities/lib/kdtree.c:32:
/home/slave/yt-x86_64/include/python2.7/pyconfig.h:1161:1: warning: "_POSIX_C_SOURCE" redefined
In file included from /usr/include/stdio.h:28,
from yt/utilities/lib/kdtree.c:28:
/usr/include/features.h:210:1: warning: this is the location of the previous definition
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1532: warning: ‘_import_array’ defined but not used
gcc: yt/utilities/lib/healpix_mk_pix2xy.c
gcc: yt/utilities/lib/healpix_pix2ang_nest.c
gcc: yt/utilities/lib/FixedInterpolator.c
yt/utilities/lib/FixedInterpolator.c: In function ‘offset_interpolate’:
yt/utilities/lib/FixedInterpolator.c:54: warning: unused variable ‘i’
yt/utilities/lib/FixedInterpolator.c: At top level:
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1532: warning: ‘_import_array’ defined but not used
gcc: yt/utilities/lib/healpix_mk_xy2pix.c
gcc: yt/utilities/lib/grid_traversal.c
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1532: warning: ‘_import_array’ defined but not used
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:226: warning: ‘_import_umath’ defined but not used
gcc: yt/utilities/lib/healpix_pix2vec_nest.c
gcc: yt/utilities/lib/healpix_ang2pix_nest.c
gcc -pthread -shared -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ build/temp.linux-x86_64-2.7/yt/utilities/lib/grid_traversal.o build/temp.linux-x86_64-2.7/yt/utilities/lib/FixedInterpolator.o build/temp.linux-x86_64-2.7/yt/utilities/lib/kdtree.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_pix2vec_nest.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_pix2ang_nest.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_ang2pix_nest.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_mk_xy2pix.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_vec2pix_nest.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_mk_pix2xy.o -lm -o yt/utilities/lib/grid_traversal.so -fopenmp
running scons
+ /home/slave/yt-x86_64/bin/python setup.py nosetests --with-answer-testing
PNG_LOCATION: png found in: /usr/include, /usr/lib
FTYPE_LOCATION: freetype found in: /usr/include, /usr/lib
HDF5_LOCATION: HDF5_DIR: /home/slave/yt-x86_64/include, /home/slave/yt-x86_64/lib
running nosetests
running egg_info
running build_src
build_src
building py_modules sources
building extension "yt.analysis_modules.halo_finding.fof.EnzoFOF" sources
building extension "yt.analysis_modules.halo_finding.hop.EnzoHop" sources
building extension "yt.frontends.ramses._ramses_reader" sources
building extension "yt.utilities.delaunay._delaunay" sources
building extension "yt.utilities.spatial.ckdtree" sources
building extension "yt.utilities.spatial._distance_wrap" sources
building extension "yt.utilities.lib.CICDeposit" sources
building extension "yt.utilities.lib.ContourFinding" sources
building extension "yt.utilities.lib.DepthFirstOctree" sources
building extension "yt.utilities.lib.fortran_reader" sources
building extension "yt.utilities.lib.freetype_writer" sources
building extension "yt.utilities.lib.geometry_utils" sources
cythonc:> build/src.linux-x86_64-2.7/yt/utilities/lib/geometry_utils.c
building extension "yt.utilities.lib.Interpolators" sources
building extension "yt.utilities.lib.marching_cubes" sources
building extension "yt.utilities.lib.misc_utilities" sources
building extension "yt.utilities.lib.Octree" sources
building extension "yt.utilities.lib.png_writer" sources
building extension "yt.utilities.lib.PointsInVolume" sources
building extension "yt.utilities.lib.QuadTree" sources
building extension "yt.utilities.lib.RayIntegrators" sources
building extension "yt.utilities.lib.VolumeIntegrator" sources
building extension "yt.utilities.lib.grid_traversal" sources
cythonc:> build/src.linux-x86_64-2.7/yt/utilities/lib/grid_traversal.c
building extension "yt.utilities.lib.GridTree" sources
building extension "yt.utilities.data_point_utilities" sources
building extension "yt.utilities.hdf5_light_reader" sources
building extension "yt.utilities.libconfig_wrapper" sources
building extension "yt.visualization._MPL" sources
building data_files sources
build_src: building npy-pkg config files
writing yt.egg-info/PKG-INFO
writing top-level names to yt.egg-info/top_level.txt
writing dependency_links to yt.egg-info/dependency_links.txt
writing entry points to yt.egg-info/entry_points.txt
reading manifest file 'yt.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'yt.egg-info/SOURCES.txt'
running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
building 'yt.utilities.lib.geometry_utils' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
compile options: '-I/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/slave/yt-x86_64/include/python2.7 -c'
extra options: '-fopenmp'
gcc: build/src.linux-x86_64-2.7/yt/utilities/lib/geometry_utils.c
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1532: warning: ‘_import_array’ defined but not used
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:226: warning: ‘_import_umath’ defined but not used
gcc -pthread -shared -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/yt/utilities/lib/geometry_utils.o -lm -o yt/utilities/lib/geometry_utils.so -fopenmp
building 'yt.utilities.lib.grid_traversal' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
compile options: '-Iyt/utilities/lib/ -I/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/slave/yt-x86_64/include/python2.7 -c'
extra options: '-fopenmp'
gcc: yt/utilities/lib/healpix_vec2pix_nest.c
yt/utilities/lib/healpix_vec2pix_nest.c: In function ‘vec2pix_nest’:
yt/utilities/lib/healpix_vec2pix_nest.c:56: warning: unused variable ‘pi’
gcc: yt/utilities/lib/kdtree.c
In file included from /home/slave/yt-x86_64/include/python2.7/Python.h:8,
from yt/utilities/lib/kdtree.h:29,
from yt/utilities/lib/kdtree.c:32:
/home/slave/yt-x86_64/include/python2.7/pyconfig.h:1161:1: warning: "_POSIX_C_SOURCE" redefined
In file included from /usr/include/stdio.h:28,
from yt/utilities/lib/kdtree.c:28:
/usr/include/features.h:210:1: warning: this is the location of the previous definition
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1532: warning: ‘_import_array’ defined but not used
gcc: yt/utilities/lib/healpix_mk_pix2xy.c
gcc: build/src.linux-x86_64-2.7/yt/utilities/lib/grid_traversal.c
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1532: warning: ‘_import_array’ defined but not used
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:226: warning: ‘_import_umath’ defined but not used
gcc: yt/utilities/lib/FixedInterpolator.c
yt/utilities/lib/FixedInterpolator.c: In function ‘offset_interpolate’:
yt/utilities/lib/FixedInterpolator.c:54: warning: unused variable ‘i’
yt/utilities/lib/FixedInterpolator.c: At top level:
/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1532: warning: ‘_import_array’ defined but not used
gcc: yt/utilities/lib/healpix_mk_xy2pix.c
gcc: yt/utilities/lib/healpix_pix2vec_nest.c
gcc: yt/utilities/lib/healpix_ang2pix_nest.c
gcc: yt/utilities/lib/healpix_pix2ang_nest.c
gcc -pthread -shared -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ -L/home/slave/yt-x86_64/lib/ -L/home/slave/yt-x86_64/lib64/ build/temp.linux-x86_64-2.7/build/src.linux-x86_64-2.7/yt/utilities/lib/grid_traversal.o build/temp.linux-x86_64-2.7/yt/utilities/lib/FixedInterpolator.o build/temp.linux-x86_64-2.7/yt/utilities/lib/kdtree.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_pix2vec_nest.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_pix2ang_nest.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_ang2pix_nest.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_mk_xy2pix.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_vec2pix_nest.o build/temp.linux-x86_64-2.7/yt/utilities/lib/healpix_mk_pix2xy.o -lm -o yt/utilities/lib/grid_traversal.so -fopenmp
running scons
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................E...................................................................................................................EE.......................................................................
======================================================================
ERROR: Failure: AttributeError ('Node' object has no attribute 'split')
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/slave/yt-x86_64/lib/python2.7/site-packages/nose/loader.py", line 231, in generate
for test in g():
File "<https://jenkins.shiningpanda-ci.com/yt-project/job/py2.7-yt_analysis-dev/ws/yt/data_objects/tests/test_streamlines.py",> line 18, in test_covering_grid
streams.integrate_through_volume()
File "<https://jenkins.shiningpanda-ci.com/yt-project/job/py2.7-yt_analysis-dev/ws/yt/visualization/streamlines.py",> line 142, in integrate_through_volume
this_node = self.volume.locate_node(stream[-step,:])
File "<https://jenkins.shiningpanda-ci.com/yt-project/job/py2.7-yt_analysis-dev/ws/yt/utilities/amr_kdtree/amr_kdtree.py",> line 227, in locate_node
return find_node(self.tree.trunk, pos)
File "<https://jenkins.shiningpanda-ci.com/yt-project/job/py2.7-yt_analysis-dev/ws/yt/utilities/amr_kdtree/amr_kdtools.py",> line 396, in find_node
if pos[node.split.dim] < node.split.pos:
AttributeError: 'Node' object has no attribute 'split'
-------------------- >> begin captured logging << --------------------
yt: DEBUG: Going to obtain ['Density']
yt: INFO: Getting field Density from 1
yt: INFO: Parameters: current_time = 0.0
yt: INFO: Parameters: domain_dimensions = [64 64 64]
yt: INFO: Parameters: domain_left_edge = [ 0. 0. 0.]
yt: INFO: Parameters: domain_right_edge = [ 1. 1. 1.]
yt: INFO: Parameters: cosmological_simulation = 0.0
yt: INFO: Parameters: current_time = 0.0
yt: INFO: Parameters: domain_dimensions = [64 64 64]
yt: INFO: Parameters: domain_left_edge = [ 0. 0. 0.]
yt: INFO: Parameters: domain_right_edge = [ 1. 1. 1.]
yt: INFO: Parameters: cosmological_simulation = 0.0
yt: DEBUG: Initializing data storage.
yt: DEBUG: Counting grids.
yt: DEBUG: Setting up classes.
yt: DEBUG: Counting grids.
yt: DEBUG: Allocating arrays for 2 grids
yt: DEBUG: Parsing hierarchy.
yt: DEBUG: Copying reverse tree
yt: DEBUG: Preparing grids
yt: DEBUG: Prepared 0 / 2 grids
yt: DEBUG: Prepared
yt: DEBUG: Constructing grid objects.
yt: DEBUG: Initializing data grid data IO
yt: DEBUG: Detecting fields.
yt: DEBUG: Adding unknown detected fields
yt: INFO: Adding z-velocity to list of fields
yt: INFO: Adding y-velocity to list of fields
yt: INFO: Adding x-velocity to list of fields
yt: INFO: Adding Density to list of fields
yt: DEBUG: Setting up derived fields
yt: DEBUG: Re-examining hierarchy
yt: DEBUG: Building AMRKDTree
yt: DEBUG: Appending object to UniformGridData (type: <class 'yt.data_objects.hierarchy.AMRRegion'>)
yt: DEBUG: Going to obtain []
yt: INFO: AMRKDTree rebuilt, Final Volume: 1.000000e+00
--------------------- >> end captured logging << ---------------------
======================================================================
ERROR: test_amr_kdtree.test_amr_kdtree
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/slave/yt-x86_64/lib/python2.7/site-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "<https://jenkins.shiningpanda-ci.com/yt-project/job/py2.7-yt_analysis-dev/ws/yt/utilities/tests/test_amr_kdtree.py",> line 34, in test_amr_kdtree
data = np.zeros(domain_dims) + 0.25
NameError: global name 'np' is not defined
======================================================================
ERROR: test_amr_kdtree.test_amr_kdtree_coverage
----------------------------------------------------------------------
Traceback (most recent call last):
File "/home/slave/yt-x86_64/lib/python2.7/site-packages/nose/case.py", line 197, in runTest
self.test(*self.arg)
File "<https://jenkins.shiningpanda-ci.com/yt-project/job/py2.7-yt_analysis-dev/ws/yt/utilities/tests/test_amr_kdtree.py",> line 46, in test_amr_kdtree_coverage
data = np.zeros(domain_dims) + 0.25
NameError: global name 'np' is not defined
----------------------------------------------------------------------
Ran 2164 tests in 647.049s
FAILED (errors=3)
Build step 'Custom Python Builder' marked build as failure
Recording test results
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