[yt-svn] Build failed in Jenkins: yt - small data #222
matthewturk at gmail.com
matthewturk at gmail.com
Thu Jan 26 08:02:31 PST 2012
See <http://localhost:8080/job/yt%20-%20small%20data/222/changes>
Changes:
[Cameron Hummels <chummels at astro.columbia.edu>] Merge.
[Cameron Hummels <chummels at astro.columbia.edu>] Adding command-line option for "reason" which is identical to "serve".
------------------------------------------
[...truncated 1068 lines...]
yt/utilities/amr_utils.c:45724:8: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result [-Wunused-result]
yt/utilities/amr_utils.c: In function ‘__pyx_f_2yt_9utilities_9amr_utils_15PartitionedGrid_integrate_ray’:
yt/utilities/amr_utils.c:22893:27: warning: ‘__pyx_v_exit_t’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_17AdaptiveRaySource_3integrate_brick’:
yt/utilities/amr_utils.c:38628:17: warning: ‘__pyx_v_dt’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_9calculate_fill_grids’:
yt/utilities/amr_utils.c:10212:30: warning: ‘__pyx_v_total’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_1RecurseOctreeByLevels’:
yt/utilities/amr_utils.c:4970:18: warning: ‘__pyx_v_cz’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/amr_utils.c:69427:34: warning: ‘__pyx_v_k’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/amr_utils.c:4505:26: note: ‘__pyx_v_k’ was declared here
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_52kdtree_get_choices’:
yt/utilities/amr_utils.c:61408:21: warning: ‘__pyx_v_my_split’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/amr_utils.c:60887:7: warning: ‘__pyx_v_best_dim’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_8find_grids_in_inclined_box’:
yt/utilities/amr_utils.c:8887:77: warning: ‘*((void *)&__pyx_v_a_vec+72)’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/amr_utils.c:9048:28: note: ‘*((void *)&__pyx_v_a_vec+72)’ was declared here
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/amr_utils.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/FixedInterpolator.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/kdtree.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/union_find.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_pix2ang_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_vec2pix_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_ang2pix_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_mk_xy2pix.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_pix2vec_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_mk_pix2xy.o -L/home/mturk/yt-x86_64/lib -L/home/mturk/yt-x86_64/lib -L. -lm -lpng -lfreetype -lpython2.7 -o yt/utilities/amr_utils.so
building 'yt.utilities.libconfig_wrapper' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
creating build/temp.linux-x86_64-2.7/yt/utilities/_libconfig
compile options: '-DHAVE_XLOCALE_H=True -Iyt/utilities/_libconfig/ -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/utilities/_libconfig/grammar.c
grammar.y:50:1: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
grammar.y:51:1: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
gcc: yt/utilities/_libconfig/libconfig.c
yt/utilities/_libconfig/libconfig.c: In function ‘__config_locale_override’:
yt/utilities/_libconfig/libconfig.c:100:2: warning: #warning "No way to modify calling thread's locale!" [-Wcpp]
yt/utilities/_libconfig/libconfig.c: In function ‘__config_locale_restore’:
yt/utilities/_libconfig/libconfig.c:121:2: warning: #warning "No way to modify calling thread's locale!" [-Wcpp]
yt/utilities/_libconfig/libconfig.c: In function ‘__config_read’:
yt/utilities/_libconfig/libconfig.c:555:19: warning: variable ‘buffer’ set but not used [-Wunused-but-set-variable]
gcc: yt/utilities/_libconfig/strbuf.c
gcc: yt/utilities/_libconfig/scanner.c
gcc: yt/utilities/_libconfig/scanctx.c
gcc: yt/utilities/libconfig_wrapper.c
yt/utilities/libconfig_wrapper.c: In function ‘__pyx_pf_2yt_9utilities_17libconfig_wrapper_22libconfigConfiguration_2read_file’:
yt/utilities/libconfig_wrapper.c:748:24: warning: assignment discards ‘const’ qualifier from pointer target type [enabled by default]
yt/utilities/libconfig_wrapper.c:757:24: warning: assignment discards ‘const’ qualifier from pointer target type [enabled by default]
yt/utilities/libconfig_wrapper.c: In function ‘__pyx_pf_2yt_9utilities_17libconfig_wrapper_22libconfigConfiguration_5get_setting’:
yt/utilities/libconfig_wrapper.c:1247:23: warning: assignment discards ‘const’ qualifier from pointer target type [enabled by default]
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/libconfig_wrapper.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/strbuf.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/libconfig.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/scanner.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/scanctx.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/grammar.o -L. -lpython2.7 -o yt/utilities/libconfig_wrapper.so
building 'yt.visualization._MPL' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
creating build/temp.linux-x86_64-2.7/yt/visualization
compile options: '-I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/visualization/_MPL.c
yt/visualization/_MPL.c: In function ‘Py_Pixelize’:
yt/visualization/_MPL.c:121:7: warning: unused variable ‘ndy’ [-Wunused-variable]
yt/visualization/_MPL.c:120:7: warning: unused variable ‘ndx’ [-Wunused-variable]
yt/visualization/_MPL.c:119:7: warning: unused variable ‘ny’ [-Wunused-variable]
yt/visualization/_MPL.c: In function ‘Py_CPixelize’:
yt/visualization/_MPL.c:352:15: warning: unused variable ‘radius’ [-Wunused-variable]
yt/visualization/_MPL.c:337:60: warning: unused variable ‘dsp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:54: warning: unused variable ‘dzsp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:48: warning: unused variable ‘dysp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:42: warning: unused variable ‘dxsp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:36: warning: unused variable ‘pysp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:30: warning: unused variable ‘pxsp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:25: warning: unused variable ‘zsp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:20: warning: unused variable ‘ysp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:15: warning: unused variable ‘xsp’ [-Wunused-variable]
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/visualization/_MPL.o -L. -lm -lpython2.7 -o yt/visualization/_MPL.so
running scons
+ cd yt/utilities/kdtree
+ make
Using Forthon ()
Forthon -F gfortran --compile_first fKD_source --no2underscores --with-numpy --fopt "-O3" fKD fKD_source.f90
make[1]: Entering directory `<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/utilities/kdtree/build/temp.linux-x86_64-2.7'>
/home/mturk/yt-x86_64/bin/python2.7 -c "from Forthon.wrappergenerator import wrappergenerator_main;wrappergenerator_main()" \
--realsize 8 \
--f90 -t linux2 --underscoring --no2underscores -F gfortran \
fKD ../../fKD.v
gfortran -fPIC -DFPSIZE=8 -fdefault-real-8 -fdefault-double-8 -DISZ=8 -fdefault-integer-8 -fimplicit-none -fno-second-underscore -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -c fKD_p.F90
gfortran -fPIC -DFPSIZE=8 -fdefault-real-8 -fdefault-double-8 -DISZ=8 -fdefault-integer-8 -fimplicit-none -fno-second-underscore -O3 -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -c ../../fKD_source.f90
gfortran -fPIC -DFPSIZE=8 -fdefault-real-8 -fdefault-double-8 -DISZ=8 -fdefault-integer-8 -fimplicit-none -fno-second-underscore -O3 -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -c ../../fKD.f90
/home/mturk/yt-x86_64/bin/python2.7 -c "from Forthon.preprocess import main;main()" --f90 -tlinux2 --underscoring --no2underscores -F gfortran /home/mturk/yt-x86_64/lib/python2.7/site-packages/Forthon/Forthon.h Forthon.h
/home/mturk/yt-x86_64/bin/python2.7 -c "from Forthon.preprocess import main;main()" --f90 -tlinux2 --underscoring --no2underscores -F gfortran /home/mturk/yt-x86_64/lib/python2.7/site-packages/Forthon/Forthon.c Forthon.c
make[1]: Leaving directory `<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/utilities/kdtree/build/temp.linux-x86_64-2.7'>
IN FORTHON_BUILDER
running build
running build_ext
building 'fKDpy' extension
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/Forthon -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c build/temp.linux-x86_64-2.7/fKDpymodule.c -o build/temp.linux-x86_64-2.7/fKDpymodule.o
In file included from build/temp.linux-x86_64-2.7/fKDpymodule.c:1:0:
build/temp.linux-x86_64-2.7/Forthon.h:116:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:117:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:118:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:119:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:129:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:130:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:131:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:132:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:151:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:152:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:157:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:158:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
In file included from build/temp.linux-x86_64-2.7/fKDpymodule.c:1:0:
build/temp.linux-x86_64-2.7/Forthon.h: In function ‘ForthonPackage_delvarattr’:
build/temp.linux-x86_64-2.7/Forthon.h:1701:20: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
build/temp.linux-x86_64-2.7/Forthon.h:1726:20: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast]
build/temp.linux-x86_64-2.7/fKDpymodule.c: In function ‘fKD_create_tree’:
build/temp.linux-x86_64-2.7/fKDpymodule.c:126:9: warning: variable ‘argno’ set but not used [-Wunused-but-set-variable]
build/temp.linux-x86_64-2.7/fKDpymodule.c: In function ‘fKD_add_tree’:
build/temp.linux-x86_64-2.7/fKDpymodule.c:157:9: warning: variable ‘argno’ set but not used [-Wunused-but-set-variable]
build/temp.linux-x86_64-2.7/fKDpymodule.c: In function ‘fKD_free_tree’:
build/temp.linux-x86_64-2.7/fKDpymodule.c:188:9: warning: variable ‘argno’ set but not used [-Wunused-but-set-variable]
build/temp.linux-x86_64-2.7/fKDpymodule.c: In function ‘fKD_find_many_r_nearest’:
build/temp.linux-x86_64-2.7/fKDpymodule.c:245:9: warning: variable ‘argno’ set but not used [-Wunused-but-set-variable]
build/temp.linux-x86_64-2.7/fKDpymodule.c: At top level:
build/temp.linux-x86_64-2.7/Forthon.h:194:15: warning: ‘cputime’ defined but not used [-Wunused-function]
build/temp.linux-x86_64-2.7/Forthon.h:574:18: warning: ‘Forthon_getscalardict’ defined but not used [-Wunused-function]
build/temp.linux-x86_64-2.7/Forthon.h:580:18: warning: ‘Forthon_getarraydict’ defined but not used [-Wunused-function]
build/temp.linux-x86_64-2.7/Forthon.h:910:12: warning: ‘Forthon_setscalardict’ defined but not used [-Wunused-function]
build/temp.linux-x86_64-2.7/Forthon.h:916:12: warning: ‘Forthon_setarraydict’ defined but not used [-Wunused-function]
gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/Forthon -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c build/temp.linux-x86_64-2.7/Forthon.c -o build/temp.linux-x86_64-2.7/Forthon.o
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/fKDpymodule.o build/temp.linux-x86_64-2.7/Forthon.o build/temp.linux-x86_64-2.7/fKD.o build/temp.linux-x86_64-2.7/fKD_p.o build/temp.linux-x86_64-2.7/fKD_source.o -L/usr/lib/gcc/x86_64-linux-gnu/4.6.1 -L/home/mturk/yt-x86_64/lib -lgfortran -lpython2.7 -o ./fKDpy.so
+ cd ../../..
[workspace] $ /bin/sh -xe /tmp/hudson366507156724312024.sh
+ export PYTHONPATH=.
+ python2.7 tests/runall.py -c gold
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Initializing TestRegistry
Initializing test_registry
This call to matplotlib.use() has no effect
because the the backend has already been chosen;
matplotlib.use() must be called *before* pylab, matplotlib.pyplot,
or matplotlib.backends is imported for the first time.
Module argparse was already imported from /home/mturk/yt-x86_64/lib/python2.7/argparse.pyc, but /home/mturk/yt-x86_64/lib/python2.7/site-packages is being added to sys.path
RUNNING TEST Test2DGasDistribution_density_x-vel_AveragedDensity
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_AveragedDensity SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_Density
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_Density SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_DivV
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_DivV SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_Entropy
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_Entropy SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_Pressure
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_Pressure SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_SoundSpeed
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_SoundSpeed SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_Temperature
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_Temperature SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_particle_density
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_particle_density SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_x-velocity
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_x-velocity SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_y-velocity
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_y-velocity SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_z-velocity
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_z-velocity SUCCEEDED
RUNNING TEST TestBooleanANDGridQuantity_BooleanANDGrid
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanANDGridQuantity_BooleanANDGrid SUCCEEDED
RUNNING TEST TestBooleanANDParticleQuantity_BooleanANDParticle
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanANDParticleQuantity_BooleanANDParticle SUCCEEDED
RUNNING TEST TestBooleanNOTGridQuantity_BooleanNOTGrid
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanNOTGridQuantity_BooleanNOTGrid SUCCEEDED
RUNNING TEST TestBooleanNOTParticleQuantity_BooleanNOTParticle
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanNOTParticleQuantity_BooleanNOTParticle SUCCEEDED
RUNNING TEST TestBooleanORGridQuantity_BooleanORGrid
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanORGridQuantity_BooleanORGrid SUCCEEDED
RUNNING TEST TestBooleanORParticleQuantity_BooleanORParticle
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanORParticleQuantity_BooleanORParticle SUCCEEDED
RUNNING TEST TestGasDistribution_density_AveragedDensity
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_AveragedDensity SUCCEEDED
RUNNING TEST TestGasDistribution_density_Density
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDCalling hop... 9233 8.000e+01
nSmooth = 65 kd->nActive = 9233
istribution_density_Density SUCCEEDED
RUNNING TEST TestGasDistribution_density_DivV
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_DivV SUCCEEDED
RUNNING TEST TestGasDistribution_density_Entropy
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_Entropy SUCCEEDED
RUNNING TEST TestGasDistribution_density_Pressure
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_Pressure SUCCEEDED
RUNNING TEST TestGasDistribution_density_SoundSpeed
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_SoundSpeed SUCCEEDED
RUNNING TEST TestGasDistribution_density_Temperature
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_Temperature SUCCEEDED
RUNNING TEST TestGasDistribution_density_particle_density
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_particle_density SUCCEEDED
RUNNING TEST TestGasDistribution_density_x-velocity
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_x-velocity SUCCEEDED
RUNNING TEST TestGasDistribution_density_y-velocity
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_y-velocity SUCCEEDED
RUNNING TEST TestGasDistribution_density_z-velocity
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_z-velocity SUCCEEDED
RUNNING TEST TestHaloCountFOF_halo_count_FOF
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestHaloCountFOF_halo_count_FOFLink length is 0.009533
Filling in 9233 particles
Number of initial groups:7642
Number of groups:6
FOF CPU TIME: 0.004000 secs
SUCCEEDED
RUNNING TEST TestHaloCountHOP_halo_count_HOP
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestHaloCountHOP_halo_count_HOPCopying arrays for 9233 particles
Building Tree...
Finding Densities...
Finding Densest Neighbors...
Grouping...
Merging Groups...
Writing Output...
All Done!Calling regroup...
No minimum group size specified. Assuming 10 particles.
ngroups = 33
SUCCEEDED
RUNNING TEST TestHaloCountPHOP_halo_count_PHOP
4ebd338ffa51_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestHaloCountPHOP_halo_count_PHOP
Traceback (most recent call last):
File "tests/runall.py", line 120, in <module>
rtr.run_test(test_name)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/utilities/answer_testing/runner.py", line 120, in run_test
self._run(test_instance)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/utilities/answer_testing/runner.py", line 132, in _run
test.run()
File "/home/mturk/yt-x86_64/src/yt-hg/yt/utilities/answer_testing/halo_tests.py", line 52, in run
halos = parallelHF(self.pf, threshold=self.threshold, dm_only=False)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/halo_objects.py", line 1993, in __init__
tree = self.tree)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/halo_objects.py", line 1405, in __init__
HaloList.__init__(self, data_source, dm_only)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/halo_objects.py", line 1022, in __init__
self._run_finder()
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/halo_objects.py", line 1433, in _run_finder
tree = self.tree)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/parallel_hop/parallel_hop_interface.py", line 73, in __init__
self._chain_hop()
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/parallel_hop/parallel_hop_interface.py", line 1529, in _chain_hop
self._init_kd_tree()
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/parallel_hop/parallel_hop_interface.py", line 351, in _init_kd_tree
fKD.dens = na.zeros(self.size, dtype='float64', order='F')
NameError: global name 'fKD' is not defined
Build step 'Execute shell' marked build as failure
Recording test results
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