[yt-svn] Build failed in Jenkins: py2.7-yt_analysis-dev #158

admin at shiningpanda.com admin at shiningpanda.com
Mon Dec 17 20:37:35 PST 2012 

See <https://jenkins.shiningpanda-ci.com/yt-project/job/py2.7-yt_analysis-dev/158/changes>

Changes:

[Nathan Goldbaum <goldbaum at ucolick.org>] Merged in MatthewTurk/yt (pull request #375: Adding some helpers for the IPython notebook)

[Matthew Turk <matthewturk at gmail.com>] Add image deposition to QuadTree.

This allows QuadTree objects (used in projections) to fill image buffers
directly.  My initial tests show this to be faster in all cases for datasets.
However, this depends strongly on the number of data points in the dataset
versus the number of points in the image buffer.  For large, complex datasets,
this always comes ou in favor of the new object.  As an example, a dataset with
8 levels, 3700 grids and 10 million zones -- small, but not trivial -- was
improved from 19 fps to 32 fps with this new method.

This method is not integrated yet, as the pixelizer is also used in a number of
other places.  However, I hope we can dynamically swap pixelizers to use it.

[Matthew Turk <matthewturk at gmail.com>] A few minor modifications to fit with Nathan's suggestions.

[Matthew Turk <matthewturk at gmail.com>] Oops, missed the description change for the notebook.

[Matthew Turk <matthewturk at gmail.com>] Adding a 'yt notebook' command that will spawn an IPython notebook.

This does not allow you to start a notebook without a password, although that
password can be blank.  Future modifications and inclusions of convenience
functions (as well as pushing HTML/JS to the server to add helper widgets) can
be placed in yt.imods.

[Matthew Turk <matthewturk at gmail.com>] Adding yt.imods for importing inside the IPython notebook.

[Matthew Turk <matthewturk at gmail.com>] Merged in atmyers/yt (pull request #378: Writing to .yt files with Chombo)

[Andrew Myers <atmyers at berkeley.edu>] fixing a bug that broke writing to .yt files with chombo

[Andrew Myers <atmyers at berkeley.edu>] merging from tip

[Andrew Myers <atmyers at berkeley.edu>] changing a few of the orion fields from 'known' to 'fallback'

------------------------------------------
[...truncated 1128 lines...]
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 4 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 5 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 4 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 5 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 6 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Updating level state to 5
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 7 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Updating level state to 5
yt: DEBUG: Updating level state to 6
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 8 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Updating level state to 5
yt: DEBUG: Updating level state to 6
yt: DEBUG: Updating level state to 7
--------------------- >> end captured logging << ---------------------

======================================================================
FAIL: FieldValues_moving7_0010_sphere_('max', (0.1, 'unitary'))_DivV
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/home/slave/yt-x86_64/lib/python2.7/site-packages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File "<https://jenkins.shiningpanda-ci.com/yt-project/job/py2.7-yt_analysis-dev/ws/yt/utilities/answer_testing/framework.py",> line 283, in __call__
    self.compare(nv, ov)
  File "<https://jenkins.shiningpanda-ci.com/yt-project/job/py2.7-yt_analysis-dev/ws/yt/utilities/answer_testing/framework.py",> line 361, in compare
    err_msg=err_msg, verbose=True)
  File "/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/testing/utils.py", line 256, in assert_equal
    return assert_array_equal(actual, desired, err_msg, verbose)
  File "/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/testing/utils.py", line 707, in assert_array_equal
    verbose=verbose, header='Arrays are not equal')
  File "/home/slave/yt-x86_64/lib/python2.7/site-packages/numpy/testing/utils.py", line 636, in assert_array_compare
    raise AssertionError(msg)
AssertionError: 
Arrays are not equal
Field values for DivV not equal.
(mismatch 100.0%)
 x: array([ -6.27176036e-16,  -8.26899768e-14,   9.62160457e-15])
 y: array([ -6.27025223e-16,  -8.26700929e-14,   9.61929092e-15])
>>  raise AssertionError('\nArrays are not equal\nField values for DivV not equal.\n(mismatch 100.0%)\n x: array([ -6.27176036e-16,  -8.26899768e-14,   9.62160457e-15])\n y: array([ -6.27025223e-16,  -8.26700929e-14,   9.61929092e-15])')
    
-------------------- >> begin captured logging << --------------------
yt: INFO: Parameters: current_time              = 0.817513171191
yt: INFO: Parameters: domain_dimensions         = [16 16 16]
yt: INFO: Parameters: domain_left_edge          = [ 0.  0.  0.]
yt: INFO: Parameters: domain_right_edge         = [ 1.  1.  1.]
yt: INFO: Parameters: cosmological_simulation   = 1
yt: INFO: Parameters: current_redshift          = 9.99102779567
yt: INFO: Parameters: omega_lambda              = 0
yt: INFO: Parameters: omega_matter              = 1
yt: INFO: Parameters: hubble_constant           = 0.5
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSphere'>)
yt: DEBUG: Going to obtain []
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 1 possible grids
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 4 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 4 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 5 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 4 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 5 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 6 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Updating level state to 5
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 7 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Updating level state to 5
yt: DEBUG: Updating level state to 6
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 8 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Updating level state to 5
yt: DEBUG: Updating level state to 6
yt: DEBUG: Updating level state to 7
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 1 possible grids
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 4 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 4 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 5 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 4 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 5 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 6 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Updating level state to 5
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 7 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Updating level state to 5
yt: DEBUG: Updating level state to 6
yt: DEBUG: Appending object to moving7_0010 (type: <class 'yt.data_objects.hierarchy.AMRSmoothedCoveringGrid'>)
yt: DEBUG: Setting bulk_velocity to [ 0.  0.  0.]
yt: DEBUG: Setting radius to 0.1
yt: DEBUG: Setting normal to [ 0.  0.  1.]
yt: DEBUG: Getting fields ['x-velocity', 'y-velocity', 'z-velocity'] from 8 possible grids
yt: DEBUG: Updating level state to 1
yt: DEBUG: Updating level state to 2
yt: DEBUG: Updating level state to 3
yt: DEBUG: Updating level state to 4
yt: DEBUG: Updating level state to 5
yt: DEBUG: Updating level state to 6
yt: DEBUG: Updating level state to 7
--------------------- >> end captured logging << ---------------------

----------------------------------------------------------------------
Ran 2120 tests in 645.858s

FAILED (failures=7)
Build step 'Custom Python Builder' marked build as failure
Recording test results

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