[yt-svn] Build failed in Jenkins: yt - small data #443
hg at spacepope.org
hg at spacepope.org
Tue Aug 7 17:01:56 PDT 2012
See <http://localhost:8081/job/yt%20-%20small%20data/443/changes>
Changes:
[Stephen Skory <s at skory.us>] Adding Forthon to install_script.sh.
[Stephen Skory <s at skory.us>] Updates for the fortran kdtree for changes in Forthon.
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[...truncated 703 lines...]
yt/utilities/data_point_utilities.c:982:9: warning: ‘x_loc’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/data_point_utilities.c: In function ‘Py_FillRegion’:
yt/utilities/data_point_utilities.c:793:30: warning: ‘to_call’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/data_point_utilities.c: In function ‘Py_CombineGrids’:
yt/utilities/data_point_utilities.c:268:9: warning: ‘grid_src_vals’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/data_point_utilities.c:269:9: warning: ‘grid_dst_vals’ may be used uninitialized in this function [-Wuninitialized]
yt/utilities/data_point_utilities.c: In function ‘Py_FindContours’:
yt/utilities/data_point_utilities.c:1115:38: warning: ‘status’ may be used uninitialized in this function [-Wuninitialized]
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/data_point_utilities.o -L. -lm -lpython2.7 -o yt/utilities/data_point_utilities.so
building 'yt.utilities.hdf5_light_reader' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
compile options: '-DH5_USE_16_API=True -I/home/mturk/yt-x86_64/include -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/utilities/hdf5_light_reader.c
yt/utilities/hdf5_light_reader.c: In function ‘Py_ReadHDF5DataSet’:
yt/utilities/hdf5_light_reader.c:168:12: warning: variable ‘type_size’ set but not used [-Wunused-but-set-variable]
yt/utilities/hdf5_light_reader.c: In function ‘get_array_from_nodename’:
yt/utilities/hdf5_light_reader.c:672:12: warning: variable ‘type_size’ set but not used [-Wunused-but-set-variable]
yt/utilities/hdf5_light_reader.c: In function ‘Py_ReadListOfDatasets’:
yt/utilities/hdf5_light_reader.c:550:7: warning: ‘nodelist’ may be used uninitialized in this function [-Wuninitialized]
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/hdf5_light_reader.o -L/home/mturk/yt-x86_64/lib -L. -lm -lhdf5 -lpython2.7 -o yt/utilities/hdf5_light_reader.so
building 'yt.utilities.libconfig_wrapper' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
creating build/temp.linux-x86_64-2.7/yt/utilities/_libconfig
compile options: '-DHAVE_XLOCALE_H=True -Iyt/utilities/_libconfig/ -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/utilities/_libconfig/grammar.c
grammar.y:50:1: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
grammar.y:51:1: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
gcc: yt/utilities/_libconfig/libconfig.c
yt/utilities/_libconfig/libconfig.c: In function ‘__config_locale_override’:
yt/utilities/_libconfig/libconfig.c:100:2: warning: #warning "No way to modify calling thread's locale!" [-Wcpp]
yt/utilities/_libconfig/libconfig.c: In function ‘__config_locale_restore’:
yt/utilities/_libconfig/libconfig.c:121:2: warning: #warning "No way to modify calling thread's locale!" [-Wcpp]
yt/utilities/_libconfig/libconfig.c: In function ‘__config_read’:
yt/utilities/_libconfig/libconfig.c:555:19: warning: variable ‘buffer’ set but not used [-Wunused-but-set-variable]
gcc: yt/utilities/_libconfig/strbuf.c
gcc: yt/utilities/_libconfig/scanner.c
gcc: yt/utilities/_libconfig/scanctx.c
gcc: yt/utilities/libconfig_wrapper.c
yt/utilities/libconfig_wrapper.c: In function ‘__pyx_pf_2yt_9utilities_17libconfig_wrapper_22libconfigConfiguration_4read_file’:
yt/utilities/libconfig_wrapper.c:853:24: warning: assignment discards ‘const’ qualifier from pointer target type [enabled by default]
yt/utilities/libconfig_wrapper.c:862:24: warning: assignment discards ‘const’ qualifier from pointer target type [enabled by default]
yt/utilities/libconfig_wrapper.c: In function ‘__pyx_pf_2yt_9utilities_17libconfig_wrapper_22libconfigConfiguration_10get_setting’:
yt/utilities/libconfig_wrapper.c:1383:23: warning: assignment discards ‘const’ qualifier from pointer target type [enabled by default]
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/libconfig_wrapper.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/strbuf.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/libconfig.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/scanner.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/scanctx.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/grammar.o -L. -lpython2.7 -o yt/utilities/libconfig_wrapper.so
building 'yt.visualization._MPL' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
creating build/temp.linux-x86_64-2.7/yt/visualization
compile options: '-I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/visualization/_MPL.c
yt/visualization/_MPL.c: In function ‘Py_Pixelize’:
yt/visualization/_MPL.c:121:7: warning: unused variable ‘ndy’ [-Wunused-variable]
yt/visualization/_MPL.c:120:7: warning: unused variable ‘ndx’ [-Wunused-variable]
yt/visualization/_MPL.c:119:7: warning: unused variable ‘ny’ [-Wunused-variable]
yt/visualization/_MPL.c: In function ‘Py_CPixelize’:
yt/visualization/_MPL.c:352:15: warning: unused variable ‘radius’ [-Wunused-variable]
yt/visualization/_MPL.c:337:60: warning: unused variable ‘dsp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:54: warning: unused variable ‘dzsp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:48: warning: unused variable ‘dysp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:42: warning: unused variable ‘dxsp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:36: warning: unused variable ‘pysp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:30: warning: unused variable ‘pxsp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:25: warning: unused variable ‘zsp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:20: warning: unused variable ‘ysp’ [-Wunused-variable]
yt/visualization/_MPL.c:337:15: warning: unused variable ‘xsp’ [-Wunused-variable]
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/visualization/_MPL.o -L. -lm -lpython2.7 -o yt/visualization/_MPL.so
running scons
+ cd yt/utilities/kdtree
+ make
Using Forthon ()
Forthon -F gfortran --compile_first fKD_source --no2underscores --fopt "-O3" fKD fKD_source.f90
Forthon fKD.v
F90Free fKD_p.F90
F90Free fKD_source.f90
F90Free fKD.f90
Preprocess Forthon.h
Preprocess Forthon.c
In file included from build/temp.linux-x86_64-2.7/fKDpymodule.c:1:0:
build/temp.linux-x86_64-2.7/Forthon.h:112:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:113:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:114:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:115:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:125:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:126:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:127:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:128:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:147:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:148:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:153:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
build/temp.linux-x86_64-2.7/Forthon.h:154:3: warning: function declaration isn’t a prototype [-Wstrict-prototypes]
Building package fKD
Setup fKD
+ cd ../../..
[workspace] $ /bin/sh -xe /tmp/hudson609756022753719651.sh
+ export PYTHONPATH=.
+ python2.7 tests/runall.py -c gold
/home/mturk/yt-x86_64/src/yt-hg/yt/visualization/image_writer.py:334: SyntaxWarning: import * only allowed at module level
def write_projection(data, filename, colorbar=True, colorbar_label=None,
Parsing Hierarchy 0% | | ETA: --:--:--
Parsing Hierarchy 10% |/// | ETA: 00:00:00
Parsing Hierarchy 20% |------- | ETA: 00:00:00
Parsing Hierarchy 30% |\\\\\\\\\\\ | ETA: 00:00:00
Parsing Hierarchy 40% |||||||||||||||| | ETA: 00:00:00
Parsing Hierarchy 50% |/////////////////// | ETA: 00:00:00
Parsing Hierarchy 60% |----------------------- | ETA: 00:00:00
Parsing Hierarchy 70% |\\\\\\\\\\\\\\\\\\\\\\\\\\\ | ETA: 00:00:00
Parsing Hierarchy 80% |||||||||||||||||||||||||||||||| | ETA: 00:00:00
Parsing Hierarchy 90% |/////////////////////////////////// | ETA: 00:00:00
Parsing Hierarchy100% ||||||||||||||||||||||||||||||||||||||||| Time: 00:00:00
Building boolean 0% | | ETA: --:--:--
Building boolean 50% |//////////////////// | ETA: 00:00:00
Building boolean100% |||||||||||||||||||||||||||||||||||||||||| Time: 00:00:00
Building boolean 0% | | ETA: --:--:--
Building boolean 50% |//////////////////// | ETA: 00:00:00
Building boolean100% |||||||||||||||||||||||||||||||||||||||||| Time: 00:00:00
Building boolean 0% | | ETA: --:--:--
Building boolean 50% |//////////////////// | ETA: 00:00:00
Building boolean100% |||||||||||||||||||||||||||||||||||||||||| Time: 00:00:00
Building boolean 0% | | ETA: --:--:--
Building boolean 33% |///////////// | ETA: 00:00:00
Building boolean 66% |-------------------------- | ETA: 00:00:00
Building boolean100% |||||||||||||||||||||||||||||||||||||||||| Time: 00:00:00
Building boolean 0% | | ETA: --:--:--
Building boolean 50% |//////////////////// | ETA: 00:00:00
Building boolean100% |||||||||||||||||||||||||||||||||||||||||| Time: 00:00:00
Building boolean 0% | | ETA: --:--:--
Building boolean 33% |///////////// | ETA: 00:00:00
Building boolean 66% |-------------------------- | ETA: 00:00:00
Building boolean100% |||||||||||||||||||||||||||||||||||||||||| Time: 00:00:00
Building boolean 0% | | ETA: --:--:--
Building boolean 50% |//////////////////// | ETA: 00:00:00
Building boolean100% |||||||||||||||||||||||||||||||||||||||||| Time: 00:00:00
Building boolean 0% | | ETA: --:--:--
Building boolean 50% |//////////////////// | ETA: 00:00:00
Building boolean100% |||||||||||||||||||||||||||||||||||||||||| Time: 00:00:00
Initializing TestRegistry
Initializing test_registry
This call to matplotlib.use() has no effect
because the the backend has already been chosen;
matplotlib.use() must be called *before* pylab, matplotlib.pyplot,
or matplotlib.backends is imported for the first time.
Module argparse was already imported from /home/mturk/yt-x86_64/lib/python2.7/argparse.pyc, but /home/mturk/yt-x86_64/lib/python2.7/site-packages is being added to sys.path
RUNNING TEST Test2DGasDistribution_density_x-vel_AveragedDensity
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_AveragedDensity SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_DivV
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_DivV SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_Entropy
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_Entropy FAILED ArrayDelta: Delta max of 0.168656782813, acceptable of 1e-07.
1563 of 16641 points above the acceptable limit
RUNNING TEST Test2DGasDistribution_density_x-vel_Pressure
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_Pressure SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_SoundSpeed
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_SoundSpeed SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_Temperature
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_Temperature SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_particle_density
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_particle_density SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_y-velocity
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_y-velocity SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_z-velocity
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_Test2DGasDistribution_density_x-vel_z-velocity SUCCEEDED
RUNNING TEST TestBooleanANDGridQuantity_BooleanANDGrid
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanANDGridQuantity_BooleanANDGrid SUCCEEDED
RUNNING TEST TestBooleanANDParticleQuantity_BooleanANDParticle
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanANDParticleQuantity_BooleanANDParticle SUCCEEDED
RUNNING TEST TestBooleanNOTGridQuantity_BooleanNOTGrid
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanNOTGridQuantity_BooleanNOTGrid SUCCEEDED
RUNNING TEST TestBooleanNOTParticleQuantity_BooleanNOTParticle
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanNOTParticleQuantity_BooleanNOTParticle SUCCEEDED
RUNNING TEST TestBooleanORGridQuantity_BooleanORGrid
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanORGridQuantity_BooleanORGrid SUCCEEDED
RUNNING TEST TestBooleanORParticleQuantity_BooleanORParticle
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestBooleanORParticleQuantity_BooleanORParticle SUCCEEDED
RUNNING TEST TestGasDistribution_density_AveragedDensity
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_AveragedDensity SUCCEEDED
RUNNING TEST TestGasDistribution_density_DivV
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_DivV SUCCEEDED
RUNNING TEST TestGasDistribution_density_Entropy
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_Entropy FAILED ArrayDelta: Delta max of 0.168656749948, acceptable of 1e-07.
30 of 33 pointsCalling hop... 9233 8.000e+01
nSmooth = 65 kd->nActive = 9233
above the acceptable limit
RUNNING TEST TestGasDistribution_density_Pressure
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_Pressure SUCCEEDED
RUNNING TEST TestGasDistribution_density_SoundSpeed
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_SoundSpeed SUCCEEDED
RUNNING TEST TestGasDistribution_density_Temperature
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_Temperature SUCCEEDED
RUNNING TEST TestGasDistribution_density_particle_density
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_particle_density SUCCEEDED
RUNNING TEST TestGasDistribution_density_x-velocity
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_x-velocity SUCCEEDED
RUNNING TEST TestGasDistribution_density_y-velocity
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_y-velocity SUCCEEDED
RUNNING TEST TestGasDistribution_density_z-velocity
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_density_z-velocity SUCCEEDED
RUNNING TEST TestHaloCountFOF_halo_count_FOF
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestHaloCountFOF_halo_count_FOFLink length is 0.009533
Filling in 9233 particles
Number of initial groups:7642
Number of groups:6
FOF CPU TIME: 0.008000 secs
SUCCEEDED
RUNNING TEST TestHaloCountHOP_halo_count_HOP
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestHaloCountHOP_halo_count_HOPCopying arrays for 9233 particles
Building Tree...
Finding Densities...
Finding Densest Neighbors...
Grouping...
Merging Groups...
Writing Output...
All Done!Calling regroup...
No minimum group size specified. Assuming 10 particles.
ngroups = 33
SUCCEEDED
RUNNING TEST TestHaloCountPHOP_halo_count_PHOP
31d1c069f5a6_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestHaloCountPHOP_halo_count_PHOP
Traceback (most recent call last):
File "tests/runall.py", line 123, in <module>
rtr.run_test(test_name)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/utilities/answer_testing/runner.py", line 121, in run_test
self._run(test_instance)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/utilities/answer_testing/runner.py", line 133, in _run
test.run()
File "/home/mturk/yt-x86_64/src/yt-hg/yt/utilities/answer_testing/halo_tests.py", line 52, in run
halos = parallelHF(self.pf, threshold=self.threshold, dm_only=False)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/halo_objects.py", line 2268, in __init__
premerge=premerge, tree=self.tree)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/halo_objects.py", line 1639, in __init__
HaloList.__init__(self, data_source, dm_only)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/halo_objects.py", line 1067, in __init__
self._run_finder()
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/halo_objects.py", line 1667, in _run_finder
tree=self.tree)
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/parallel_hop/parallel_hop_interface.py", line 73, in __init__
self._chain_hop()
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/parallel_hop/parallel_hop_interface.py", line 1536, in _chain_hop
self._init_kd_tree()
File "/home/mturk/yt-x86_64/src/yt-hg/yt/analysis_modules/halo_finding/parallel_hop/parallel_hop_interface.py", line 351, in _init_kd_tree
fKD.dens = na.zeros(self.size, dtype='float64', order='F')
NameError: global name 'fKD' is not defined
Build step 'Execute shell' marked build as failure
Recording test results
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