[Yt-svn] Build failed in Jenkins: yt - small data #62

[matthewturk at gmail.com]

See <http://localhost:8080/job/yt%20-%20small%20data/62/changes>

Changes:

[Matthew Turk <matthewturk at gmail.com>] Adding cubehelix colormap, based on patch from Pim Schellart and astro-ph/1108.5083

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[...truncated 182 lines...]
yt/frontends/ramses/_ramses_reader.cpp:1591:37: warning: comparison between signed and unsigned integer expressions
yt/frontends/ramses/_ramses_reader.cpp:1613:35: warning: comparison between signed and unsigned integer expressions
yt/frontends/ramses/_ramses_reader.cpp: In function ‘PyObject* __pyx_pf_2yt_9frontends_6ramses_14_ramses_reader_17RAMSES_tree_proxy_3count_zones(PyObject*, PyObject*)’:
yt/frontends/ramses/_ramses_reader.cpp:2125:87: warning: comparison between signed and unsigned integer expressions
yt/frontends/ramses/_ramses_reader.cpp: In function ‘PyObject* __pyx_pf_2yt_9frontends_6ramses_14_ramses_reader_17RAMSES_tree_proxy_6fill_hierarchy_arrays(PyObject*, PyObject*, PyObject*)’:
yt/frontends/ramses/_ramses_reader.cpp:3316:55: warning: comparison between signed and unsigned integer expressions
yt/frontends/ramses/_ramses_reader.cpp: In function ‘PyObject* __pyx_tp_new_2yt_9frontends_6ramses_14_ramses_reader_RAMSES_tree_proxy(PyTypeObject*, PyObject*, PyObject*)’:
yt/frontends/ramses/_ramses_reader.cpp:1335:37: warning: ‘__pyx_v_local_hydro_data’ may be used uninitialized in this function
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h: At global scope:
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1187:1: warning: ‘int _import_array()’ defined but not used
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:196:1: warning: ‘int _import_umath()’ defined but not used
g++ -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/frontends/ramses/_ramses_reader.o -L. -lstdc++ -lpython2.7 -o yt/frontends/ramses/_ramses_reader.so
building 'yt.utilities.delaunay._delaunay' extension
compiling C++ sources
C compiler: g++ -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -fPIC

creating build/temp.linux-x86_64-2.7/yt/utilities
creating build/temp.linux-x86_64-2.7/yt/utilities/delaunay
compile options: '-Iyt/utilities/delaunay -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
g++: yt/utilities/delaunay/VoronoiDiagramGenerator.cpp
yt/utilities/delaunay/VoronoiDiagramGenerator.cpp: In member function ‘bool VoronoiDiagramGenerator::voronoi(int)’:
yt/utilities/delaunay/VoronoiDiagramGenerator.cpp:919:18: warning: ‘newintstar.Point::x’ may be used uninitialized in this function
yt/utilities/delaunay/VoronoiDiagramGenerator.cpp:919:18: warning: ‘newintstar.Point::y’ may be used uninitialized in this function
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h: At global scope:
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1187:1: warning: ‘int _import_array()’ defined but not used
g++: yt/utilities/delaunay/delaunay_utils.cpp
g++: yt/utilities/delaunay/natneighbors.cpp
g++: yt/utilities/delaunay/_delaunay.cpp
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* compute_planes_method(PyObject*, PyObject*)’:
yt/utilities/delaunay/_delaunay.cpp:315:19: warning: ‘y’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:315:23: warning: ‘z’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:315:27: warning: ‘nodes’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* nn_interpolate_unstructured_method(PyObject*, PyObject*)’:
yt/utilities/delaunay/_delaunay.cpp:469:9: warning: ‘intz’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* nn_interpolate_method(PyObject*, PyObject*)’:
yt/utilities/delaunay/_delaunay.cpp:592:9: warning: ‘y’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:592:9: warning: ‘z’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:592:9: warning: ‘centers’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:592:9: warning: ‘nodes’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:592:9: warning: ‘neighbors’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* getMesh(int, double*, double*)’:
yt/utilities/delaunay/_delaunay.cpp:209:5: warning: ‘vertices’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:116:36: warning: ‘tri_edges’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:116:48: warning: ‘tri_nbrs’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* delaunay_method(PyObject*, PyObject*)’:
yt/utilities/delaunay/_delaunay.cpp:667:19: warning: ‘y’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* linear_interpolate_method(PyObject*, PyObject*)’:
yt/utilities/delaunay/_delaunay.cpp:377:15: warning: ‘planes’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:377:28: warning: ‘y’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:377:32: warning: ‘nodes’ may be used uninitialized in this function
g++ -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/delaunay/_delaunay.o build/temp.linux-x86_64-2.7/yt/utilities/delaunay/VoronoiDiagramGenerator.o build/temp.linux-x86_64-2.7/yt/utilities/delaunay/delaunay_utils.o build/temp.linux-x86_64-2.7/yt/utilities/delaunay/natneighbors.o -L. -lpython2.7 -o yt/utilities/delaunay/_delaunay.so
building 'yt.utilities.data_point_utilities' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC

compile options: '-I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/utilities/data_point_utilities.c
yt/utilities/data_point_utilities.c: In function ‘Py_Bin1DProfile’:
yt/utilities/data_point_utilities.c:280:12: warning: unused variable ‘j’
yt/utilities/data_point_utilities.c: In function ‘Py_FillRegion’:
yt/utilities/data_point_utilities.c:992:35: warning: unused variable ‘rk’
yt/utilities/data_point_utilities.c:992:31: warning: unused variable ‘rj’
yt/utilities/data_point_utilities.c:992:27: warning: unused variable ‘ri’
yt/utilities/data_point_utilities.c:987:40: warning: unused variable ‘ize’
yt/utilities/data_point_utilities.c:987:35: warning: unused variable ‘iye’
yt/utilities/data_point_utilities.c:987:30: warning: unused variable ‘ixe’
yt/utilities/data_point_utilities.c:987:25: warning: unused variable ‘izs’
yt/utilities/data_point_utilities.c:987:20: warning: unused variable ‘iys’
yt/utilities/data_point_utilities.c:987:15: warning: unused variable ‘ixs’
yt/utilities/data_point_utilities.c: In function ‘Py_FillBuffer’:
yt/utilities/data_point_utilities.c:1195:29: warning: unused variable ‘rk’
yt/utilities/data_point_utilities.c:1195:25: warning: unused variable ‘rj’
yt/utilities/data_point_utilities.c:1195:21: warning: unused variable ‘ri’
yt/utilities/data_point_utilities.c:1190:40: warning: unused variable ‘ize’
yt/utilities/data_point_utilities.c:1190:35: warning: unused variable ‘iye’
yt/utilities/data_point_utilities.c:1190:30: warning: unused variable ‘ixe’
yt/utilities/data_point_utilities.c:1190:25: warning: unused variable ‘izs’
yt/utilities/data_point_utilities.c:1190:20: warning: unused variable ‘iys’
yt/utilities/data_point_utilities.c:1190:15: warning: unused variable ‘ixs’
yt/utilities/data_point_utilities.c:1187:23: warning: unused variable ‘direction’
yt/utilities/data_point_utilities.c:1187:19: warning: unused variable ‘ll’
yt/utilities/data_point_utilities.c:1325:9: warning: ‘x_loc’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:1325:16: warning: ‘y_loc’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:1183:31: warning: ‘c_data’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:1183:21: warning: ‘g_data’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:1248:9: warning: ‘n_fields’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c: In function ‘Py_FillRegion’:
yt/utilities/data_point_utilities.c:994:12: warning: ‘to_call’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:1051:9: warning: ‘n_fields’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c: In function ‘Py_CombineGrids’:
yt/utilities/data_point_utilities.c:268:9: warning: ‘grid_src_vals’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:269:9: warning: ‘grid_dst_vals’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c: In function ‘Py_FindContours’:
yt/utilities/data_point_utilities.c:1401:9: warning: ‘status’ may be used uninitialized in this function
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/data_point_utilities.o -L. -lm -lpython2.7 -o yt/utilities/data_point_utilities.so
building 'yt.utilities.hdf5_light_reader' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC

compile options: '-DH5_USE_16_API=True -I/home/mturk/yt-x86_64/include -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/utilities/hdf5_light_reader.c
yt/utilities/hdf5_light_reader.c: In function ‘Py_ReadListOfDatasets’:
yt/utilities/hdf5_light_reader.c:550:7: warning: ‘nodelist’ may be used uninitialized in this function
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/hdf5_light_reader.o -L/home/mturk/yt-x86_64/lib -L. -lm -lhdf5 -lpython2.7 -o yt/utilities/hdf5_light_reader.so
building 'yt.utilities.amr_utils' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC

creating build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils
compile options: '-DPNG_SETJMP_NOT_SUPPORTED=True -Iyt/utilities/_amr_utils/ -I/home/mturk/yt-x86_64/include -I/home/mturk/yt-x86_64/include -I/home/mturk/yt-x86_64/include/freetype2 -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/utilities/_amr_utils/healpix_pix2vec_nest.c
gcc: yt/utilities/_amr_utils/healpix_vec2pix_nest.c
yt/utilities/_amr_utils/healpix_vec2pix_nest.c: In function ‘vec2pix_nest’:
yt/utilities/_amr_utils/healpix_vec2pix_nest.c:56:30: warning: unused variable ‘pi’
gcc: yt/utilities/_amr_utils/healpix_mk_xy2pix.c
gcc: yt/utilities/_amr_utils/union_find.c
gcc: yt/utilities/_amr_utils/healpix_mk_pix2xy.c
gcc: yt/utilities/_amr_utils/FixedInterpolator.c
yt/utilities/_amr_utils/FixedInterpolator.c: In function ‘offset_interpolate’:
yt/utilities/_amr_utils/FixedInterpolator.c:54:9: warning: unused variable ‘i’
yt/utilities/_amr_utils/FixedInterpolator.c: At top level:
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1187:1: warning: ‘_import_array’ defined but not used
yt/utilities/_amr_utils/FixedInterpolator.c: In function ‘eval_gradient’:
yt/utilities/_amr_utils/FixedInterpolator.c:177:1: warning: control reaches end of non-void function
gcc: yt/utilities/_amr_utils/kdtree.c
In file included from /home/mturk/yt-x86_64/include/python2.7/Python.h:8:0,
                 from yt/utilities/_amr_utils/kdtree.h:29,
                 from yt/utilities/_amr_utils/kdtree.c:32:
/home/mturk/yt-x86_64/include/python2.7/pyconfig.h:1155:0: warning: "_POSIX_C_SOURCE" redefined
/usr/include/features.h:214:0: note: this is the location of the previous definition
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1187:1: warning: ‘_import_array’ defined but not used
gcc: yt/utilities/_amr_utils/healpix_pix2ang_nest.c
gcc: yt/utilities/_amr_utils/healpix_ang2pix_nest.c
gcc: yt/utilities/amr_utils.c
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_15PartitionedGrid_4get_isocontour_triangles’:
yt/utilities/amr_utils.c:29066:9: warning: implicit declaration of function ‘offset_fill’
yt/utilities/amr_utils.c: At top level:
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1187:1: warning: ‘_import_array’ defined but not used
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:196:1: warning: ‘_import_umath’ defined but not used
yt/utilities/amr_utils.c:14287:13: warning: ‘__pyx_f_2yt_9utilities_9amr_utils_CountTriangles’ defined but not used
yt/utilities/amr_utils.c:41494:14: warning: ‘__pyx_f_2yt_9utilities_9amr_utils_read_art_vars’ defined but not used
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_37read_castro_particles’:
yt/utilities/amr_utils.c:42685:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_35read_art_root_vars’:
yt/utilities/amr_utils.c:41416:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_34read_art_tree’:
yt/utilities/amr_utils.c:40649:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40659:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40669:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40679:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40689:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40797:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40816:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40932:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40941:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40970:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40999:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:41063:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:41073:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:41084:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_33count_art_octs’:
yt/utilities/amr_utils.c:40123:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40132:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40165:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40174:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40222:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_32read_tiger_section’:
yt/utilities/amr_utils.c:39916:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c: In function ‘__pyx_f_2yt_9utilities_9amr_utils_15PartitionedGrid_integrate_ray’:
yt/utilities/amr_utils.c:19669:28: warning: ‘__pyx_v_exit_t’ may be used uninitialized in this function
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_1RecurseOctreeByLevels’:
yt/utilities/amr_utils.c:4302:26: warning: ‘__pyx_v_k’ may be used uninitialized in this function
yt/utilities/amr_utils.c:4321:28: warning: ‘__pyx_v_cz’ may be used uninitialized in this function
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/amr_utils.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/FixedInterpolator.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/kdtree.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/union_find.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_pix2ang_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_vec2pix_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_ang2pix_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_mk_xy2pix.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_pix2vec_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_mk_pix2xy.o -L/home/mturk/yt-x86_64/lib -L/home/mturk/yt-x86_64/lib -L. -lm -lpng -lfreetype -lpython2.7 -o yt/utilities/amr_utils.so
building 'yt.utilities.libconfig_wrapper' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC

creating build/temp.linux-x86_64-2.7/yt/utilities/_libconfig
compile options: '-DHAVE_XLOCALE_H=True -Iyt/utilities/_libconfig/ -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/utilities/_libconfig/grammar.c
grammar.y:50:1: warning: function declaration isn’t a prototype
grammar.y:51:1: warning: function declaration isn’t a prototype
gcc: yt/utilities/_libconfig/libconfig.c
yt/utilities/_libconfig/libconfig.c: In function ‘__config_locale_override’:
yt/utilities/_libconfig/libconfig.c:100:2: warning: #warning "No way to modify calling thread's locale!"
yt/utilities/_libconfig/libconfig.c: In function ‘__config_locale_restore’:
yt/utilities/_libconfig/libconfig.c:121:2: warning: #warning "No way to modify calling thread's locale!"
gcc: yt/utilities/_libconfig/strbuf.c
gcc: yt/utilities/_libconfig/scanner.c
gcc: yt/utilities/_libconfig/scanctx.c
gcc: yt/utilities/libconfig_wrapper.c
yt/utilities/libconfig_wrapper.c: In function ‘__pyx_pf_2yt_9utilities_17libconfig_wrapper_22libconfigConfiguration_2read_file’:
yt/utilities/libconfig_wrapper.c:727:24: warning: assignment discards qualifiers from pointer target type
yt/utilities/libconfig_wrapper.c:736:24: warning: assignment discards qualifiers from pointer target type
yt/utilities/libconfig_wrapper.c: In function ‘__pyx_pf_2yt_9utilities_17libconfig_wrapper_22libconfigConfiguration_5get_setting’:
yt/utilities/libconfig_wrapper.c:1221:23: warning: assignment discards qualifiers from pointer target type
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/libconfig_wrapper.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/strbuf.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/libconfig.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/scanner.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/scanctx.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/grammar.o -L. -lpython2.7 -o yt/utilities/libconfig_wrapper.so
building 'yt.visualization._MPL' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC

creating build/temp.linux-x86_64-2.7/yt/visualization
compile options: '-I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/visualization/_MPL.c
yt/visualization/_MPL.c: In function ‘Py_Pixelize’:
yt/visualization/_MPL.c:121:7: warning: unused variable ‘ndy’
yt/visualization/_MPL.c:120:7: warning: unused variable ‘ndx’
yt/visualization/_MPL.c:119:7: warning: unused variable ‘ny’
yt/visualization/_MPL.c: In function ‘Py_CPixelize’:
yt/visualization/_MPL.c:350:15: warning: unused variable ‘radius’
yt/visualization/_MPL.c:335:60: warning: unused variable ‘dsp’
yt/visualization/_MPL.c:335:54: warning: unused variable ‘dzsp’
yt/visualization/_MPL.c:335:48: warning: unused variable ‘dysp’
yt/visualization/_MPL.c:335:42: warning: unused variable ‘dxsp’
yt/visualization/_MPL.c:335:36: warning: unused variable ‘pysp’
yt/visualization/_MPL.c:335:30: warning: unused variable ‘pxsp’
yt/visualization/_MPL.c:335:25: warning: unused variable ‘zsp’
yt/visualization/_MPL.c:335:20: warning: unused variable ‘ysp’
yt/visualization/_MPL.c:335:15: warning: unused variable ‘xsp’
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/visualization/_MPL.o -L. -lm -lpython2.7 -o yt/visualization/_MPL.so
running scons
[workspace] $ /bin/sh -xe /tmp/hudson945725588323321006.sh
+ export PYTHONPATH=.
+ python2.7 tests/runall.py -c gold
Traceback (most recent call last):
  File "tests/runall.py", line 5, in <module>
    from yt.utilities.answer_testing.api import \
  File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/utilities/answer_testing/__init__.py",> line 26, in <module>
    import runner, output_tests
  File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/utilities/answer_testing/runner.py",> line 33, in <module>
    from output_tests import test_registry, MultipleOutputTest, \
  File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/utilities/answer_testing/output_tests.py",> line 26, in <module>
    from yt.mods import *
  File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/mods.py",> line 44, in <module>
    from yt.data_objects.api import \
  File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/data_objects/api.py",> line 37, in <module>
    from static_output import \
  File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/data_objects/static_output.py",> line 44, in <module>
    _pf_store = ParameterFileStore()
  File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/utilities/parameter_file_storage.py",> line 80, in __init__
    self._records = self.read_db()
  File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/utilities/parameter_file_storage.py",> line 204, in read_db
    for v in vals:
  File "/home/mturk/yt-x86_64/lib/python2.7/csv.py", line 104, in next
    row = self.reader.next()
_csv.Error: line contains NULL byte
Build step 'Execute shell' marked build as failure
Recording test results