[Yt-svn] Build failed in Jenkins: yt - small data #58
matthewturk at gmail.com
matthewturk at gmail.com
Thu Sep 8 09:01:56 PDT 2011
See <http://localhost:8080/job/yt%20-%20small%20data/58/changes>
Changes:
[Matthew Turk <matthewturk at gmail.com>] Merging
[Matthew Turk <matthewturk at gmail.com>] Two more minor changes. Net speedup, for my 30 level, 36gb run to calculate 1
ghost zone for every grid is a factor of four.
[Matthew Turk <matthewturk at gmail.com>] Adding a regular-grid-to-regular-grid specific interpolator. Much faster for
smoothed covering grids (and gives identical results as the old one, even where
those results may eventually need improvement, such as during truncation of
bounds) and thus for ghost zones.
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[...truncated 208 lines...]
g++: yt/utilities/delaunay/natneighbors.cpp
g++: yt/utilities/delaunay/_delaunay.cpp
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* compute_planes_method(PyObject*, PyObject*)’:
yt/utilities/delaunay/_delaunay.cpp:315:19: warning: ‘y’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:315:23: warning: ‘z’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:315:27: warning: ‘nodes’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* nn_interpolate_unstructured_method(PyObject*, PyObject*)’:
yt/utilities/delaunay/_delaunay.cpp:469:9: warning: ‘intz’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* nn_interpolate_method(PyObject*, PyObject*)’:
yt/utilities/delaunay/_delaunay.cpp:592:9: warning: ‘y’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:592:9: warning: ‘z’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:592:9: warning: ‘centers’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:592:9: warning: ‘nodes’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:592:9: warning: ‘neighbors’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* getMesh(int, double*, double*)’:
yt/utilities/delaunay/_delaunay.cpp:209:5: warning: ‘vertices’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:116:36: warning: ‘tri_edges’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:116:48: warning: ‘tri_nbrs’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* delaunay_method(PyObject*, PyObject*)’:
yt/utilities/delaunay/_delaunay.cpp:667:19: warning: ‘y’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp: In function ‘PyObject* linear_interpolate_method(PyObject*, PyObject*)’:
yt/utilities/delaunay/_delaunay.cpp:377:15: warning: ‘planes’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:377:28: warning: ‘y’ may be used uninitialized in this function
yt/utilities/delaunay/_delaunay.cpp:377:32: warning: ‘nodes’ may be used uninitialized in this function
g++ -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/delaunay/_delaunay.o build/temp.linux-x86_64-2.7/yt/utilities/delaunay/VoronoiDiagramGenerator.o build/temp.linux-x86_64-2.7/yt/utilities/delaunay/delaunay_utils.o build/temp.linux-x86_64-2.7/yt/utilities/delaunay/natneighbors.o -L. -lpython2.7 -o yt/utilities/delaunay/_delaunay.so
building 'yt.utilities.data_point_utilities' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
compile options: '-I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/utilities/data_point_utilities.c
yt/utilities/data_point_utilities.c: In function ‘Py_Bin1DProfile’:
yt/utilities/data_point_utilities.c:280:12: warning: unused variable ‘j’
yt/utilities/data_point_utilities.c: In function ‘Py_FillRegion’:
yt/utilities/data_point_utilities.c:992:35: warning: unused variable ‘rk’
yt/utilities/data_point_utilities.c:992:31: warning: unused variable ‘rj’
yt/utilities/data_point_utilities.c:992:27: warning: unused variable ‘ri’
yt/utilities/data_point_utilities.c:987:40: warning: unused variable ‘ize’
yt/utilities/data_point_utilities.c:987:35: warning: unused variable ‘iye’
yt/utilities/data_point_utilities.c:987:30: warning: unused variable ‘ixe’
yt/utilities/data_point_utilities.c:987:25: warning: unused variable ‘izs’
yt/utilities/data_point_utilities.c:987:20: warning: unused variable ‘iys’
yt/utilities/data_point_utilities.c:987:15: warning: unused variable ‘ixs’
yt/utilities/data_point_utilities.c: In function ‘Py_FillBuffer’:
yt/utilities/data_point_utilities.c:1195:29: warning: unused variable ‘rk’
yt/utilities/data_point_utilities.c:1195:25: warning: unused variable ‘rj’
yt/utilities/data_point_utilities.c:1195:21: warning: unused variable ‘ri’
yt/utilities/data_point_utilities.c:1190:40: warning: unused variable ‘ize’
yt/utilities/data_point_utilities.c:1190:35: warning: unused variable ‘iye’
yt/utilities/data_point_utilities.c:1190:30: warning: unused variable ‘ixe’
yt/utilities/data_point_utilities.c:1190:25: warning: unused variable ‘izs’
yt/utilities/data_point_utilities.c:1190:20: warning: unused variable ‘iys’
yt/utilities/data_point_utilities.c:1190:15: warning: unused variable ‘ixs’
yt/utilities/data_point_utilities.c:1187:23: warning: unused variable ‘direction’
yt/utilities/data_point_utilities.c:1187:19: warning: unused variable ‘ll’
yt/utilities/data_point_utilities.c:1325:9: warning: ‘x_loc’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:1325:16: warning: ‘y_loc’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:1183:31: warning: ‘c_data’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:1183:21: warning: ‘g_data’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:1248:9: warning: ‘n_fields’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c: In function ‘Py_FillRegion’:
yt/utilities/data_point_utilities.c:994:12: warning: ‘to_call’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:1051:9: warning: ‘n_fields’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c: In function ‘Py_CombineGrids’:
yt/utilities/data_point_utilities.c:268:9: warning: ‘grid_src_vals’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c:269:9: warning: ‘grid_dst_vals’ may be used uninitialized in this function
yt/utilities/data_point_utilities.c: In function ‘Py_FindContours’:
yt/utilities/data_point_utilities.c:1401:9: warning: ‘status’ may be used uninitialized in this function
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/data_point_utilities.o -L. -lm -lpython2.7 -o yt/utilities/data_point_utilities.so
building 'yt.utilities.hdf5_light_reader' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
compile options: '-DH5_USE_16_API=True -I/home/mturk/yt-x86_64/include -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/utilities/hdf5_light_reader.c
yt/utilities/hdf5_light_reader.c: In function ‘Py_ReadListOfDatasets’:
yt/utilities/hdf5_light_reader.c:550:7: warning: ‘nodelist’ may be used uninitialized in this function
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/hdf5_light_reader.o -L/home/mturk/yt-x86_64/lib -L. -lm -lhdf5 -lpython2.7 -o yt/utilities/hdf5_light_reader.so
building 'yt.utilities.amr_utils' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
creating build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils
compile options: '-DPNG_SETJMP_NOT_SUPPORTED=True -Iyt/utilities/_amr_utils/ -I/home/mturk/yt-x86_64/include -I/home/mturk/yt-x86_64/include -I/home/mturk/yt-x86_64/include/freetype2 -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/utilities/_amr_utils/healpix_pix2vec_nest.c
gcc: yt/utilities/_amr_utils/healpix_vec2pix_nest.c
yt/utilities/_amr_utils/healpix_vec2pix_nest.c: In function ‘vec2pix_nest’:
yt/utilities/_amr_utils/healpix_vec2pix_nest.c:56:30: warning: unused variable ‘pi’
gcc: yt/utilities/_amr_utils/healpix_mk_xy2pix.c
gcc: yt/utilities/_amr_utils/union_find.c
gcc: yt/utilities/_amr_utils/healpix_mk_pix2xy.c
gcc: yt/utilities/_amr_utils/FixedInterpolator.c
yt/utilities/_amr_utils/FixedInterpolator.c: In function ‘offset_interpolate’:
yt/utilities/_amr_utils/FixedInterpolator.c:54:9: warning: unused variable ‘i’
yt/utilities/_amr_utils/FixedInterpolator.c: At top level:
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1187:1: warning: ‘_import_array’ defined but not used
yt/utilities/_amr_utils/FixedInterpolator.c: In function ‘eval_gradient’:
yt/utilities/_amr_utils/FixedInterpolator.c:177:1: warning: control reaches end of non-void function
gcc: yt/utilities/_amr_utils/kdtree.c
In file included from /home/mturk/yt-x86_64/include/python2.7/Python.h:8:0,
from yt/utilities/_amr_utils/kdtree.h:29,
from yt/utilities/_amr_utils/kdtree.c:32:
/home/mturk/yt-x86_64/include/python2.7/pyconfig.h:1155:0: warning: "_POSIX_C_SOURCE" redefined
/usr/include/features.h:214:0: note: this is the location of the previous definition
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1187:1: warning: ‘_import_array’ defined but not used
gcc: yt/utilities/_amr_utils/healpix_pix2ang_nest.c
gcc: yt/utilities/_amr_utils/healpix_ang2pix_nest.c
gcc: yt/utilities/amr_utils.c
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_15PartitionedGrid_4get_isocontour_triangles’:
yt/utilities/amr_utils.c:29059:9: warning: implicit declaration of function ‘offset_fill’
yt/utilities/amr_utils.c: At top level:
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__multiarray_api.h:1187:1: warning: ‘_import_array’ defined but not used
/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include/numpy/__ufunc_api.h:196:1: warning: ‘_import_umath’ defined but not used
yt/utilities/amr_utils.c:14280:13: warning: ‘__pyx_f_2yt_9utilities_9amr_utils_CountTriangles’ defined but not used
yt/utilities/amr_utils.c:41487:14: warning: ‘__pyx_f_2yt_9utilities_9amr_utils_read_art_vars’ defined but not used
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_37read_castro_particles’:
yt/utilities/amr_utils.c:42678:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_35read_art_root_vars’:
yt/utilities/amr_utils.c:41409:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_34read_art_tree’:
yt/utilities/amr_utils.c:40642:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40652:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40662:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40672:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40682:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40790:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40809:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40925:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40934:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40963:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40992:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:41056:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:41066:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:41077:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_33count_art_octs’:
yt/utilities/amr_utils.c:40116:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40125:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40158:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40167:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c:40215:10: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_32read_tiger_section’:
yt/utilities/amr_utils.c:39909:12: warning: ignoring return value of ‘fread’, declared with attribute warn_unused_result
yt/utilities/amr_utils.c: In function ‘__pyx_f_2yt_9utilities_9amr_utils_15PartitionedGrid_integrate_ray’:
yt/utilities/amr_utils.c:19662:28: warning: ‘__pyx_v_exit_t’ may be used uninitialized in this function
yt/utilities/amr_utils.c: In function ‘__pyx_pf_2yt_9utilities_9amr_utils_1RecurseOctreeByLevels’:
yt/utilities/amr_utils.c:4300:26: warning: ‘__pyx_v_k’ may be used uninitialized in this function
yt/utilities/amr_utils.c:4319:28: warning: ‘__pyx_v_cz’ may be used uninitialized in this function
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/amr_utils.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/FixedInterpolator.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/kdtree.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/union_find.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_pix2ang_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_vec2pix_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_ang2pix_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_mk_xy2pix.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_pix2vec_nest.o build/temp.linux-x86_64-2.7/yt/utilities/_amr_utils/healpix_mk_pix2xy.o -L/home/mturk/yt-x86_64/lib -L/home/mturk/yt-x86_64/lib -L. -lm -lpng -lfreetype -lpython2.7 -o yt/utilities/amr_utils.so
building 'yt.utilities.libconfig_wrapper' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
creating build/temp.linux-x86_64-2.7/yt/utilities/_libconfig
compile options: '-DHAVE_XLOCALE_H=True -Iyt/utilities/_libconfig/ -I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/utilities/_libconfig/grammar.c
grammar.y:50:1: warning: function declaration isn’t a prototype
grammar.y:51:1: warning: function declaration isn’t a prototype
gcc: yt/utilities/_libconfig/libconfig.c
yt/utilities/_libconfig/libconfig.c: In function ‘__config_locale_override’:
yt/utilities/_libconfig/libconfig.c:100:2: warning: #warning "No way to modify calling thread's locale!"
yt/utilities/_libconfig/libconfig.c: In function ‘__config_locale_restore’:
yt/utilities/_libconfig/libconfig.c:121:2: warning: #warning "No way to modify calling thread's locale!"
gcc: yt/utilities/_libconfig/strbuf.c
gcc: yt/utilities/_libconfig/scanner.c
gcc: yt/utilities/_libconfig/scanctx.c
gcc: yt/utilities/libconfig_wrapper.c
yt/utilities/libconfig_wrapper.c: In function ‘__pyx_pf_2yt_9utilities_17libconfig_wrapper_22libconfigConfiguration_2read_file’:
yt/utilities/libconfig_wrapper.c:727:24: warning: assignment discards qualifiers from pointer target type
yt/utilities/libconfig_wrapper.c:736:24: warning: assignment discards qualifiers from pointer target type
yt/utilities/libconfig_wrapper.c: In function ‘__pyx_pf_2yt_9utilities_17libconfig_wrapper_22libconfigConfiguration_5get_setting’:
yt/utilities/libconfig_wrapper.c:1221:23: warning: assignment discards qualifiers from pointer target type
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/utilities/libconfig_wrapper.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/strbuf.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/libconfig.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/scanner.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/scanctx.o build/temp.linux-x86_64-2.7/yt/utilities/_libconfig/grammar.o -L. -lpython2.7 -o yt/utilities/libconfig_wrapper.so
building 'yt.visualization._MPL' extension
compiling C sources
C compiler: gcc -pthread -fno-strict-aliasing -g -O2 -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC
creating build/temp.linux-x86_64-2.7/yt/visualization
compile options: '-I/home/mturk/yt-x86_64/lib/python2.7/site-packages/numpy/core/include -I/home/mturk/yt-x86_64/include/python2.7 -c'
gcc: yt/visualization/_MPL.c
yt/visualization/_MPL.c: In function ‘Py_Pixelize’:
yt/visualization/_MPL.c:121:7: warning: unused variable ‘ndy’
yt/visualization/_MPL.c:120:7: warning: unused variable ‘ndx’
yt/visualization/_MPL.c:119:7: warning: unused variable ‘ny’
yt/visualization/_MPL.c: In function ‘Py_CPixelize’:
yt/visualization/_MPL.c:350:15: warning: unused variable ‘radius’
yt/visualization/_MPL.c:335:60: warning: unused variable ‘dsp’
yt/visualization/_MPL.c:335:54: warning: unused variable ‘dzsp’
yt/visualization/_MPL.c:335:48: warning: unused variable ‘dysp’
yt/visualization/_MPL.c:335:42: warning: unused variable ‘dxsp’
yt/visualization/_MPL.c:335:36: warning: unused variable ‘pysp’
yt/visualization/_MPL.c:335:30: warning: unused variable ‘pxsp’
yt/visualization/_MPL.c:335:25: warning: unused variable ‘zsp’
yt/visualization/_MPL.c:335:20: warning: unused variable ‘ysp’
yt/visualization/_MPL.c:335:15: warning: unused variable ‘xsp’
gcc -pthread -shared -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ -L/home/mturk/yt-x86_64/lib64/ -L/home/mturk/yt-x86_64/lib/ build/temp.linux-x86_64-2.7/yt/visualization/_MPL.o -L. -lm -lpython2.7 -o yt/visualization/_MPL.so
running scons
[workspace] $ /bin/sh -xe /tmp/hudson4692622201440987439.sh
+ export PYTHONPATH=.
+ python2.7 tests/runall.py -c gold
Parsing Hierarchy 0% | | ETA: --:--:--
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Parsing Hierarchy 30% |\\\\\\\\\\\ | ETA: 00:00:00
Parsing Hierarchy 40% |||||||||||||||| | ETA: 00:00:00
Parsing Hierarchy 50% |/////////////////// | ETA: 00:00:00
Parsing Hierarchy 60% |----------------------- | ETA: 00:00:00
Parsing Hierarchy 70% |\\\\\\\\\\\\\\\\\\\\\\\\\\\ | ETA: 00:00:00
Parsing Hierarchy 80% |||||||||||||||||||||||||||||||| | ETA: 00:00:00
Parsing Hierarchy 90% |/////////////////////////////////// | ETA: 00:00:00
Parsing Hierarchy100% ||||||||||||||||||||||||||||||||||||||||| Time: 00:00:00
Warning: divide by zero encountered in divide
Warning: divide by zero encountered in divide
Warning: invalid value encountered in sqrt
Warning: divide by zero encountered in divide
Warning: divide by zero encountered in divide
Warning: invalid value encountered in sqrt
Warning: divide by zero encountered in divide
Initializing TestRegistry
Initializing test_registry
This call to matplotlib.use() has no effect
because the the backend has already been chosen;
matplotlib.use() must be called *before* pylab, matplotlib.pyplot,
or matplotlib.backends is imported for the first time.
97262a5a252b_moving7_0010_65ab4e48a76918f089c28495de190cfe Running moving7_0010_TestGasDistribution_profile_density_test_AveragedDensity
Traceback (most recent call last):
File "tests/runall.py", line 99, in <module>
rtr.run_test(test_name)
File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/utilities/answer_testing/runner.py",> line 116, in run_test
self._run(test_instance)
File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/utilities/answer_testing/runner.py",> line 128, in _run
test.run()
File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/utilities/answer_testing/hydro_tests.py",> line 88, in run
weight=self.weight)
File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/visualization/plot_collection.py",> line 942, in add_profile_object
profile.add_fields(fields[1], weight=weight, accumulation=accumulation)
File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/data_objects/profiles.py",> line 146, in add_fields
self._lazy_add_fields(fields, weight, accumulation)
File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/data_objects/profiles.py",> line 105, in _lazy_add_fields
args=args, check_cut=True)
File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/data_objects/profiles.py",> line 55, in save_state
tr = func(*args, **kwargs)
File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/data_objects/profiles.py",> line 242, in _bin_field
source_data = self._get_field(source, field, check_cut)
File "<http://localhost:8080/job/yt%20-%20small%20data/ws/yt/data_objects/profiles.py",> line 182, in _get_field
data.append(source[field][pointI].ravel().astype('float64'))
IndexError: index (4) out of range (0<=index<3) in dimension 0
Build step 'Execute shell' marked build as failure
Recording test results
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