[Yt-svn] Build failed in Jenkins: yt - galaxy0030 #32
matthewturk at gmail.com
matthewturk at gmail.com
Fri Oct 21 23:05:01 PDT 2011
See <http://localhost:8080/job/yt%20-%20galaxy0030/32/changes>
Changes:
[Britton Smith <brittonsmith at gmail.com>] Fixed a bad variable name and moved .data to .field_data in a test.
[Sam Skillman <sam.skillman at gmail.com>] Adding ParallelAnalysisInterface.__init__(self) to other Camera classes that overwrite __init__() and therefore were not initializing all the parallell goodness.
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running scons
[workspace] $ /bin/sh -xe /tmp/hudson7346164726897918939.sh
+ export PYTHONPATH=.
+ python2.7 tests/runall.py -c gold -f /home/mturk/Research/data/JHK-DD0030/galaxy0030
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Warning: invalid value encountered in sqrt
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Initializing TestRegistry
Initializing test_registry
This call to matplotlib.use() has no effect
because the the backend has already been chosen;
matplotlib.use() must be called *before* pylab, matplotlib.pyplot,
or matplotlib.backends is imported for the first time.
RUNNING TEST Test2DGasDistribution_density_x-vel_AveragedDensity
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_Test2DGasDistribution_density_x-vel_AveragedDensity SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_Density
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_Test2DGasDistribution_density_x-vel_Density SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_DivV
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_Test2DGasDistribution_density_x-vel_DivV SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_Entropy
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_Test2DGasDistribution_density_x-vel_Entropy SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_Pressure
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_Test2DGasDistribution_density_x-vel_Pressure SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_SoundSpeed
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_Test2DGasDistribution_density_x-vel_SoundSpeed SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_Temperature
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_Test2DGasDistribution_density_x-vel_Temperature SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_particle_density
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_Test2DGasDistribution_density_x-vel_particle_density SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_x-velocity
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_Test2DGasDistribution_density_x-vel_x-velocity SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_y-velocity
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_Test2DGasDistribution_density_x-vel_y-velocity SUCCEEDED
RUNNING TEST Test2DGasDistribution_density_x-vel_z-velocity
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_Test2DGasDistribution_density_x-vel_z-velocity SUCCEEDED
RUNNING TEST TestGasDistribution_density_AveragedDensity
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestGasDistribution_density_AveragedDensity SUCCEEDED
RUNNING TEST TestGasDistribution_density_Density
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestGasDistribution_density_Density SUCCEEDED
RUNNING TEST TestGasDistribution_density_DivV
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestGasDistribution_density_DivV SUCCEEDED
RUNNING TEST TestGasDistribution_density_Entropy
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestGasDistribution_density_Entropy SUCCEEDED
RUNNING TEST TestGasDistribution_density_Pressure
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestGasDistribution_density_Pressure SUCCEEDED
RUNNING TEST TestGasDistribution_density_SoundSpeed
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestGasDistribution_density_SoundSpeed SUCCEEDED
RUNNING TEST TestGasDistribution_density_Temperature
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestGasDistribution_density_Temperature SUCCEEDED
RUNNING TEST TestGasDistribution_density_particle_density
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestGasDistribution_density_particle_density SUCCEEDED
RUNNING TEST TestGasDistribution_density_x-velocity
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestGasDistribution_density_x-velocity SUCCEEDED
RUNNING TEST TestGasDistribution_density_y-velocity
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running gWarning: invalid value encountered in divide
Warning: invalid value encountered in divide
Warning: invalid value encountered in divide
Warning: invalid value encountered in divide
Calling hop... 1124453 8.000e+01
nSmooth = 65 kd->nActive = 1124453
alaxy0030_TestGasDistribution_density_y-velocity SUCCEEDED
RUNNING TEST TestGasDistribution_density_z-velocity
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestGasDistribution_density_z-velocity SUCCEEDED
RUNNING TEST TestHaloCountFOF_halo_count_FOF
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestHaloCountFOF_halo_count_FOFLink length is 0.001923
Filling in 1124453 particles
Number of initial groups:215069
Number of groups:2402
FOF CPU TIME: 33.210000 secs
SUCCEEDED
RUNNING TEST TestHaloCountHOP_halo_count_HOP
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestHaloCountHOP_halo_count_HOPCopying arrays for 1124453 particles
Building Tree...
Finding Densities...
Finding Densest Neighbors...
Grouping...
Merging Groups...
Writing Output...
All Done!Calling regroup...
No minimum group size specified. Assuming 10 particles.
ngroups = 5849
SUCCEEDED
RUNNING TEST TestHaloCountPHOP_halo_count_PHOP
8c2c87d59bdf_galaxy0030_68951d2383b906f87e2df88c689176ea Running galaxy0030_TestHaloCountPHOP_halo_count_PHOP
Traceback (most recent call last):
File "tests/runall.py", line 114, in <module>
rtr.run_test(test_name)
File "<http://localhost:8080/job/yt%20-%20galaxy0030/ws/yt/utilities/answer_testing/runner.py",> line 120, in run_test
self._run(test_instance)
File "<http://localhost:8080/job/yt%20-%20galaxy0030/ws/yt/utilities/answer_testing/runner.py",> line 132, in _run
test.run()
File "<http://localhost:8080/job/yt%20-%20galaxy0030/ws/yt/utilities/answer_testing/halo_tests.py",> line 52, in run
halos = parallelHF(self.pf, threshold=self.threshold, dm_only=False)
File "<http://localhost:8080/job/yt%20-%20galaxy0030/ws/yt/analysis_modules/halo_finding/halo_objects.py",> line 1972, in __init__
threshold=threshold, dm_only=dm_only, rearrange=rearrange, premerge=premerge)
File "<http://localhost:8080/job/yt%20-%20galaxy0030/ws/yt/analysis_modules/halo_finding/halo_objects.py",> line 1397, in __init__
HaloList.__init__(self, data_source, dm_only)
File "<http://localhost:8080/job/yt%20-%20galaxy0030/ws/yt/analysis_modules/halo_finding/halo_objects.py",> line 1021, in __init__
self._run_finder()
File "<http://localhost:8080/job/yt%20-%20galaxy0030/ws/yt/analysis_modules/halo_finding/halo_objects.py",> line 1424, in _run_finder
self.threshold, rearrange=self.rearrange, premerge=self.premerge)
File "<http://localhost:8080/job/yt%20-%20galaxy0030/ws/yt/analysis_modules/halo_finding/parallel_hop/parallel_hop_interface.py",> line 70, in __init__
self._chain_hop()
File "<http://localhost:8080/job/yt%20-%20galaxy0030/ws/yt/analysis_modules/halo_finding/parallel_hop/parallel_hop_interface.py",> line 1467, in _chain_hop
self._init_kd_tree()
File "<http://localhost:8080/job/yt%20-%20galaxy0030/ws/yt/analysis_modules/halo_finding/parallel_hop/parallel_hop_interface.py",> line 347, in _init_kd_tree
fKD.dens = na.zeros(self.size, dtype='float64', order='F')
NameError: global name 'fKD' is not defined
Build step 'Execute shell' marked build as failure
Recording test results
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