[Yt-svn] yt-commit r560 - in trunk/doc: . build/doctrees build/html build/html/_sources build/html/tutorial source

[mturk at wrangler.dreamhost.com]

Author: mturk
Date: Mon Jun 16 14:23:46 2008
New Revision: 560
URL: http://yt.spacepope.org/changeset/560

Log:
Minor shuffling.  Added information about maintained installations.



Added:
   trunk/doc/build/doctrees/getting_started.doctree   (contents, props changed)
   trunk/doc/build/html/_sources/getting_started.txt
   trunk/doc/build/html/getting_started.html
   trunk/doc/source/getting_started.rst
Modified:
   trunk/doc/Makefile
   trunk/doc/build/doctrees/environment.pickle
   trunk/doc/build/doctrees/index.doctree
   trunk/doc/build/doctrees/intro.doctree
   trunk/doc/build/html/_sources/index.txt
   trunk/doc/build/html/_sources/intro.txt
   trunk/doc/build/html/index.html
   trunk/doc/build/html/intro.html
   trunk/doc/build/html/searchindex.json
   trunk/doc/build/html/tutorial/index.html
   trunk/doc/source/index.rst
   trunk/doc/source/intro.rst

Modified: trunk/doc/Makefile
==============================================================================
--- trunk/doc/Makefile	(original)
+++ trunk/doc/Makefile	Mon Jun 16 14:23:46 2008
@@ -23,7 +23,8 @@
 	@echo "  linkcheck to check all external links for integrity"
 
 clean:
-	-rm -rf build/*
+	@echo "I WILL NOT CLEAN THIS FOR YOU"
+	#-rm -rf build/*
 
 html:
 	mkdir -p build/html build/doctrees

Modified: trunk/doc/build/doctrees/environment.pickle
==============================================================================
Binary files. No diff available.

Added: trunk/doc/build/doctrees/getting_started.doctree
==============================================================================
Binary file. No diff available.

Modified: trunk/doc/build/doctrees/index.doctree
==============================================================================
Binary files. No diff available.

Modified: trunk/doc/build/doctrees/intro.doctree
==============================================================================
Binary files. No diff available.

Added: trunk/doc/build/html/_sources/getting_started.txt
==============================================================================
--- (empty file)
+++ trunk/doc/build/html/_sources/getting_started.txt	Mon Jun 16 14:23:46 2008
@@ -0,0 +1,103 @@
+===============
+Getting Started
+===============
+
+Maintained Installations
+========================
+
+As of right now, I maintain an installation of yt on several machines.  I try
+to keep them up to date with the stable branch.
+
+DataStar (SDSC)
+---------------
+
+To use yt on 
+`DataStar <http://www.sdsc.edu/us/resources/datastar/>`_,
+you need to ensure you are using the correct
+installation of Python 2.4 and the correct set of python packages.  In my
+.bashrc I have:
+
+.. code-block:: bash
+
+   export PATH=/usr/local/apps/python_2.4.2_64/bin:$PATH
+   export PYTHONPATH=/users/stanford/mturk/local/lib/python2.4/site-packages/
+
+which ensures that you are using my installation of yt and the correct, 64-bit
+global installation of Python2.4.
+
+Orange and Red (SLAC)
+---------------------
+
+To use yt on `Orange <http://kipac.stanford.edu/collab/computing/hardware/orange>`_
+or `Red <http://www.sgi.com/company_info/newsroom/press_releases/2005/april/space_sciences.html>`_
+you have to set your pythonpath appropriately.  I have created a script called
+'pywrapper.sh' that sets up your PATH, PYTHONPATH and LD_LIBRARY_PATH.
+
+.. code-block:: bash
+
+   $ export ARCH_PATH="/u/ki/mturk/ki12/`uname -p`_local/"
+   $ $ARCH_PATH/bin/pywrapper.sh my_script.py
+
+where my_script.py is the script you wish to run.
+
+Binary Packages
+===============
+
+Installing From Source
+======================
+
+Prerequisites for yt
+--------------------
+
+A driving factor in the development of yt over the months leading to release
+0.3 has been the reduction of dependencies.  To that extent, only a few
+packages are required for the base usage, and a GUI toolkit if you are going to use
+the graphical user interface, Reason.
+
+ * `Python <http://python.org/>`_, at least version 2.4, but preferably 2.5.
+ * `HDF5 <http://www.hdfgroup.org/>`_, the data storage backend used by Enzo
+   and yt (if you can run Enzo, this is already installed!)
+ * `NumPy <http://numpy.scipy.org/>`_, the fast numerical backend for Python
+ * `MatPlotLib <http://matplotlib.sf.net/>`_, the plotting package
+ * `wxPython <http://www.wxpython.org/>`_, the GUI toolkit
+
+(If you are only interested in manipulating data without any graphical plotting
+or interfaces, you only need to install NumPy and Python!)
+
+Installing the Necessary Packages
+---------------------------------
+
+Installing Python itself is usually quite simple, and often very fast.  Because
+we're setting up a small system of packages, even if you have a system-wide
+install of python2.5 it can be easier in some cases to create a local directory
+structure:
+
+.. code-block:: bash
+
+   $ tar xvf Python-2.5.2.tar.gz
+   $ cd Python-2.5.2
+   $ ./configure --prefix=$HOME/local/
+   $ make install
+
+This will create (if necessary) a directory named local in your home directory,
+along with the necessary subdirectories.  When the executable
+``$HOME/lcoal/bin/python2.4`` is used to install a package, it will install it
+to the ``$HOME/local/`` directory structure.
+
+The python packages are fairly straightforward to install.  The process of
+installing packages in python has been greatly simplified over the last few
+years with the addition of setuptools, but for these particular packages I
+typically recommend installing from source, which for Python packages consists
+of changing to the source directory and issues the command:
+
+.. code-block:: bash
+
+   $ tar xvfz $PKGNAME.tar.gz
+   $ cd $PKGNAME
+   $ python2.5 setup.py install
+
+This method works for NumPy, Matplotlib and yt itself, but for wxPython, I
+**strongly** suggest you seek binaries for your platform.  If they are not
+available, I recommend you read the ``INSTALL`` file and follow its directions
+closely.
+

Modified: trunk/doc/build/html/_sources/index.txt
==============================================================================
--- trunk/doc/build/html/_sources/index.txt	(original)
+++ trunk/doc/build/html/_sources/index.txt	Mon Jun 16 14:23:46 2008
@@ -10,6 +10,7 @@
    :maxdepth: 2
 
    intro
+   getting_started
    tutorial/index
    cookbook/index
    extending/index

Modified: trunk/doc/build/html/_sources/intro.txt
==============================================================================
--- trunk/doc/build/html/_sources/intro.txt	(original)
+++ trunk/doc/build/html/_sources/intro.txt	Mon Jun 16 14:23:46 2008
@@ -35,58 +35,3 @@
 
 ```EXPAND```
 
-Prerequisites for yt
---------------------
-
-A driving factor in the development of yt over the months leading to release
-0.3 has been the reduction of dependencies.  To that extent, only a few
-packages are required for the base usage, and a GUI toolkit if you are going to use
-the graphical user interface, Reason.
-
- * `Python <http://python.org/>`_, at least version 2.4, but preferably 2.5.
- * `HDF5 <http://www.hdfgroup.org/>`_, the data storage backend used by Enzo
-   and yt (if you can run Enzo, this is already installed!)
- * `NumPy <http://numpy.scipy.org/>`_, the fast numerical backend for Python
- * `MatPlotLib <http://matplotlib.sf.net/>`_, the plotting package
- * `wxPython <http://www.wxpython.org/>`_, the GUI toolkit
-
-(If you are only interested in manipulating data without any graphical plotting
-or interfaces, you only need to install NumPy and Python!)
-
-Installing the Necessary Packages
----------------------------------
-
-Installing Python itself is usually quite simple, and often very fast.  Because
-we're setting up a small system of packages, even if you have a system-wide
-install of python2.5 it can be easier in some cases to create a local directory
-structure:
-
-.. code-block:: bash
-
-   $ tar xvf Python-2.5.2.tar.gz
-   $ cd Python-2.5.2
-   $ ./configure --prefix=$HOME/local/
-   $ make install
-
-This will create (if necessary) a directory named local in your home directory,
-along with the necessary subdirectories.  When the executable
-``$HOME/lcoal/bin/python2.4`` is used to install a package, it will install it
-to the ``$HOME/local/`` directory structure.
-
-The python packages are fairly straightforward to install.  The process of
-installing packages in python has been greatly simplified over the last few
-years with the addition of setuptools, but for these particular packages I
-typically recommend installing from source, which for Python packages consists
-of changing to the source directory and issues the command:
-
-.. code-block:: bash
-
-   $ tar xvfz $PKGNAME.tar.gz
-   $ cd $PKGNAME
-   $ python2.5 setup.py install
-
-This method works for NumPy, Matplotlib and yt itself, but for wxPython, I
-**strongly** suggest you seek binaries for your platform.  If they are not
-available, I recommend you read the ``INSTALL`` file and follow its directions
-closely.
-

Added: trunk/doc/build/html/getting_started.html
==============================================================================
--- (empty file)
+++ trunk/doc/build/html/getting_started.html	Mon Jun 16 14:23:46 2008
@@ -0,0 +1,191 @@
+<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
+  "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"><html xmlns="http://www.w3.org/1999/xhtml">
+  <head>
+    <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
+    <title>Getting Started — yt v0.3-pre documentation</title>
+    <link rel="stylesheet" href="_static/default.css" type="text/css" />
+    <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
+    <script type="text/javascript">
+      var DOCUMENTATION_OPTIONS = {
+        URL_ROOT:   '',
+        VERSION:    '0.3-pre'
+      };
+    </script>
+    <script type="text/javascript" src="_static/jquery.js"></script>
+    <script type="text/javascript" src="_static/interface.js"></script>
+    <script type="text/javascript" src="_static/doctools.js"></script>
+    <link rel="contents" title="Global table of contents" href="contents.html" />
+    <link rel="index" title="Global index" href="genindex.html" />
+    <link rel="search" title="Search" href="search.html" />
+    <link rel="top" title="yt v0.3-pre documentation" href="index.html" />
+    <link rel="next" title="A Short Tutorial" href="tutorial/index.html" />
+    <link rel="prev" title="Introduction" href="intro.html" />
+  </head>
+  <body>
+    <div class="related">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px"><a href="genindex.html" title="General Index" accesskey="I">index</a></li>
+        <li class="right"><a href="modindex.html" title="Global Module Index" accesskey="M">modules</a> |</li>
+          <li class="right"><a href="tutorial/index.html" title="A Short Tutorial" accesskey="N">next</a> |</li>
+          <li class="right"><a href="intro.html" title="Introduction" accesskey="P">previous</a> |</li>
+    <li><a href="http://yt.enzotools.org/">yt</a> »</li>
+    
+        <li><a href="index.html">yt v0.3-pre documentation</a> »</li>
+
+      </ul>
+    </div>
+    <div class="document">
+      <div class="documentwrapper">
+        <div class="bodywrapper">
+          <div class="body">
+            
+  
+  <div class="section">
+<h1 id="getting-started">Getting Started<a class="headerlink" href="#getting-started" title="Permalink to this headline">¶</a></h1>
+<div class="section">
+<h2 id="maintained-installations">Maintained Installations<a class="headerlink" href="#maintained-installations" title="Permalink to this headline">¶</a></h2>
+<p>As of right now, I maintain an installation of yt on several machines.  I try
+to keep them up to date with the stable branch.</p>
+<div class="section">
+<h3 id="datastar-sdsc">DataStar (SDSC)<a class="headerlink" href="#datastar-sdsc" title="Permalink to this headline">¶</a></h3>
+<p>To use yt on
+<a class="reference" href="http://www.sdsc.edu/us/resources/datastar/">DataStar</a>,
+you need to ensure you are using the correct
+installation of Python 2.4 and the correct set of python packages.  In my
+.bashrc I have:</p>
+<div class="highlight"><pre><span class="nb">export </span><span class="nv">PATH</span><span class="o">=</span>/usr/local/apps/python_2.4.2_64/bin:<span class="nv">$PATH</span>
+<span class="nb">export </span><span class="nv">PYTHONPATH</span><span class="o">=</span>/users/stanford/mturk/local/lib/python2.4/site-packages/
+</pre></div>
+<p>which ensures that you are using my installation of yt and the correct, 64-bit
+global installation of Python2.4.</p>
+</div>
+<div class="section">
+<h3 id="orange-and-red-slac">Orange and Red (SLAC)<a class="headerlink" href="#orange-and-red-slac" title="Permalink to this headline">¶</a></h3>
+<p>To use yt on <a class="reference" href="http://kipac.stanford.edu/collab/computing/hardware/orange">Orange</a>
+or <a class="reference" href="http://www.sgi.com/company_info/newsroom/press_releases/2005/april/space_sciences.html">Red</a>
+you have to set your pythonpath appropriately.  I have created a script called
+‘pywrapper.sh’ that sets up your PATH, PYTHONPATH and LD_LIBRARY_PATH.</p>
+<div class="highlight"><pre><span class="nv">$ </span><span class="nb">export </span><span class="nv">ARCH_PATH</span><span class="o">=</span><span class="s2">"/u/ki/mturk/ki12/`uname -p`_local/"</span>
+<span class="nv">$ $ARCH_PATH</span>/bin/pywrapper.sh my_script.py
+</pre></div>
+<p>where my_script.py is the script you wish to run.</p>
+</div>
+</div>
+<div class="section">
+<h2 id="binary-packages">Binary Packages<a class="headerlink" href="#binary-packages" title="Permalink to this headline">¶</a></h2>
+</div>
+<div class="section">
+<h2 id="installing-from-source">Installing From Source<a class="headerlink" href="#installing-from-source" title="Permalink to this headline">¶</a></h2>
+<div class="section">
+<h3 id="prerequisites-for-yt">Prerequisites for yt<a class="headerlink" href="#prerequisites-for-yt" title="Permalink to this headline">¶</a></h3>
+<p>A driving factor in the development of yt over the months leading to release
+0.3 has been the reduction of dependencies.  To that extent, only a few
+packages are required for the base usage, and a GUI toolkit if you are going to use
+the graphical user interface, Reason.</p>
+<blockquote>
+<ul class="simple">
+<li><a class="reference" href="http://python.org/">Python</a>, at least version 2.4, but preferably 2.5.</li>
+<li><a class="reference" href="http://www.hdfgroup.org/">HDF5</a>, the data storage backend used by Enzo
+and yt (if you can run Enzo, this is already installed!)</li>
+<li><a class="reference" href="http://numpy.scipy.org/">NumPy</a>, the fast numerical backend for Python</li>
+<li><a class="reference" href="http://matplotlib.sf.net/">MatPlotLib</a>, the plotting package</li>
+<li><a class="reference" href="http://www.wxpython.org/">wxPython</a>, the GUI toolkit</li>
+</ul>
+</blockquote>
+<p>(If you are only interested in manipulating data without any graphical plotting
+or interfaces, you only need to install NumPy and Python!)</p>
+</div>
+<div class="section">
+<h3 id="installing-the-necessary-packages">Installing the Necessary Packages<a class="headerlink" href="#installing-the-necessary-packages" title="Permalink to this headline">¶</a></h3>
+<p>Installing Python itself is usually quite simple, and often very fast.  Because
+we’re setting up a small system of packages, even if you have a system-wide
+install of python2.5 it can be easier in some cases to create a local directory
+structure:</p>
+<div class="highlight"><pre><span class="nv">$ </span>tar xvf Python-2.5.2.tar.gz
+<span class="nv">$ </span><span class="nb">cd </span>Python-2.5.2
+<span class="nv">$ </span>./configure --prefix<span class="o">=</span><span class="nv">$HOME</span>/local/
+<span class="nv">$ </span>make install
+</pre></div>
+<p>This will create (if necessary) a directory named local in your home directory,
+along with the necessary subdirectories.  When the executable
+<tt class="docutils literal"><span class="pre">$HOME/lcoal/bin/python2.4</span></tt> is used to install a package, it will install it
+to the <tt class="docutils literal"><span class="pre">$HOME/local/</span></tt> directory structure.</p>
+<p>The python packages are fairly straightforward to install.  The process of
+installing packages in python has been greatly simplified over the last few
+years with the addition of setuptools, but for these particular packages I
+typically recommend installing from source, which for Python packages consists
+of changing to the source directory and issues the command:</p>
+<div class="highlight"><pre><span class="nv">$ </span>tar xvfz <span class="nv">$PKGNAME</span>.tar.gz
+<span class="nv">$ </span><span class="nb">cd</span> <span class="nv">$PKGNAME</span>
+<span class="nv">$ </span>python2.5 setup.py install
+</pre></div>
+<p>This method works for NumPy, Matplotlib and yt itself, but for wxPython, I
+<strong>strongly</strong> suggest you seek binaries for your platform.  If they are not
+available, I recommend you read the <tt class="docutils literal"><span class="pre">INSTALL</span></tt> file and follow its directions
+closely.</p>
+</div>
+</div>
+</div>
+
+
+          </div>
+        </div>
+      </div>
+      <div class="sidebar">
+        <div class="sidebarwrapper">
+            <h3>Table Of Contents</h3>
+            <ul>
+<li><a class="reference" href="">Getting Started</a><ul>
+<li><a class="reference" href="#maintained-installations">Maintained Installations</a><ul>
+<li><a class="reference" href="#datastar-sdsc">DataStar (SDSC)</a></li>
+<li><a class="reference" href="#orange-and-red-slac">Orange and Red (SLAC)</a></li>
+</ul>
+</li>
+<li><a class="reference" href="#binary-packages">Binary Packages</a></li>
+<li><a class="reference" href="#installing-from-source">Installing From Source</a><ul>
+<li><a class="reference" href="#prerequisites-for-yt">Prerequisites for yt</a></li>
+<li><a class="reference" href="#installing-the-necessary-packages">Installing the Necessary Packages</a></li>
+</ul>
+</li>
+</ul>
+</li>
+</ul>
+
+            <h4>Previous topic</h4>
+            <p class="topless"><a href="intro.html" title="previous chapter">Introduction</a></p>
+            <h4>Next topic</h4>
+            <p class="topless"><a href="tutorial/index.html" title="next chapter">A Short Tutorial</a></p>
+            <h3>This Page</h3>
+            <ul class="this-page-menu">
+              <li><a href="_sources/getting_started.txt">Show Source</a></li>
+            </ul>
+            <h3>Quick search</h3>
+            <form class="search" action="search.html" method="get">
+              <input type="text" name="q" size="18" /> <input type="submit" value="Go" />
+              <input type="hidden" name="check_keywords" value="yes" />
+              <input type="hidden" name="area" value="default" />
+            </form>
+        </div>
+      </div>
+      <div class="clearer"></div>
+    </div>
+    <div class="related">
+      <h3>Navigation</h3>
+      <ul>
+        <li class="right" style="margin-right: 10px"><a href="genindex.html" title="General Index" accesskey="I">index</a></li>
+        <li class="right"><a href="modindex.html" title="Global Module Index" accesskey="M">modules</a> |</li>
+          <li class="right"><a href="tutorial/index.html" title="A Short Tutorial" accesskey="N">next</a> |</li>
+          <li class="right"><a href="intro.html" title="Introduction" accesskey="P">previous</a> |</li>
+    <li><a href="http://yt.enzotools.org/">yt</a> »</li>
+    
+        <li><a href="index.html">yt v0.3-pre documentation</a> »</li>
+
+      </ul>
+    </div>
+    <div class="footer">
+      © Copyright 2008, Matthew J. Turk.
+      Last updated on Jun 16, 2008.
+    </div>
+  </body>
+</html>
\ No newline at end of file

Modified: trunk/doc/build/html/index.html
==============================================================================
--- trunk/doc/build/html/index.html	(original)
+++ trunk/doc/build/html/index.html	Mon Jun 16 14:23:46 2008
@@ -46,8 +46,14 @@
 <li><a class="reference" href="intro.html">Introduction</a><ul>
 <li><a class="reference" href="intro.html#history">History</a></li>
 <li><a class="reference" href="intro.html#what-yt-is-and-is-not">What yt is and is not</a></li>
-<li><a class="reference" href="intro.html#prerequisites-for-yt">Prerequisites for yt</a></li>
-<li><a class="reference" href="intro.html#installing-the-necessary-packages">Installing the Necessary Packages</a></li>
+</ul>
+</li>
+</ul>
+<ul>
+<li><a class="reference" href="getting_started.html">Getting Started</a><ul>
+<li><a class="reference" href="getting_started.html#maintained-installations">Maintained Installations</a></li>
+<li><a class="reference" href="getting_started.html#binary-packages">Binary Packages</a></li>
+<li><a class="reference" href="getting_started.html#installing-from-source">Installing From Source</a></li>
 </ul>
 </li>
 </ul>

Modified: trunk/doc/build/html/intro.html
==============================================================================
--- trunk/doc/build/html/intro.html	(original)
+++ trunk/doc/build/html/intro.html	Mon Jun 16 14:23:46 2008
@@ -18,7 +18,7 @@
     <link rel="index" title="Global index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
     <link rel="top" title="yt v0.3-pre documentation" href="index.html" />
-    <link rel="next" title="A Short Tutorial" href="tutorial/index.html" />
+    <link rel="next" title="Getting Started" href="getting_started.html" />
     <link rel="prev" title="yt Overview" href="index.html" />
   </head>
   <body>
@@ -27,7 +27,7 @@
       <ul>
         <li class="right" style="margin-right: 10px"><a href="genindex.html" title="General Index" accesskey="I">index</a></li>
         <li class="right"><a href="modindex.html" title="Global Module Index" accesskey="M">modules</a> |</li>
-          <li class="right"><a href="tutorial/index.html" title="A Short Tutorial" accesskey="N">next</a> |</li>
+          <li class="right"><a href="getting_started.html" title="Getting Started" accesskey="N">next</a> |</li>
           <li class="right"><a href="index.html" title="yt Overview" accesskey="P">previous</a> |</li>
     <li><a href="http://yt.enzotools.org/">yt</a> »</li>
     
@@ -72,54 +72,6 @@
 functionality.</p>
 <p><tt class="docutils literal"><span class="pre">`EXPAND`</span></tt></p>
 </div>
-<div class="section">
-<h2 id="prerequisites-for-yt">Prerequisites for yt<a class="headerlink" href="#prerequisites-for-yt" title="Permalink to this headline">¶</a></h2>
-<p>A driving factor in the development of yt over the months leading to release
-0.3 has been the reduction of dependencies.  To that extent, only a few
-packages are required for the base usage, and a GUI toolkit if you are going to use
-the graphical user interface, Reason.</p>
-<blockquote>
-<ul class="simple">
-<li><a class="reference" href="http://python.org/">Python</a>, at least version 2.4, but preferably 2.5.</li>
-<li><a class="reference" href="http://www.hdfgroup.org/">HDF5</a>, the data storage backend used by Enzo
-and yt (if you can run Enzo, this is already installed!)</li>
-<li><a class="reference" href="http://numpy.scipy.org/">NumPy</a>, the fast numerical backend for Python</li>
-<li><a class="reference" href="http://matplotlib.sf.net/">MatPlotLib</a>, the plotting package</li>
-<li><a class="reference" href="http://www.wxpython.org/">wxPython</a>, the GUI toolkit</li>
-</ul>
-</blockquote>
-<p>(If you are only interested in manipulating data without any graphical plotting
-or interfaces, you only need to install NumPy and Python!)</p>
-</div>
-<div class="section">
-<h2 id="installing-the-necessary-packages">Installing the Necessary Packages<a class="headerlink" href="#installing-the-necessary-packages" title="Permalink to this headline">¶</a></h2>
-<p>Installing Python itself is usually quite simple, and often very fast.  Because
-we’re setting up a small system of packages, even if you have a system-wide
-install of python2.5 it can be easier in some cases to create a local directory
-structure:</p>
-<div class="highlight"><pre><span class="nv">$ </span>tar xvf Python-2.5.2.tar.gz
-<span class="nv">$ </span><span class="nb">cd </span>Python-2.5.2
-<span class="nv">$ </span>./configure --prefix<span class="o">=</span><span class="nv">$HOME</span>/local/
-<span class="nv">$ </span>make install
-</pre></div>
-<p>This will create (if necessary) a directory named local in your home directory,
-along with the necessary subdirectories.  When the executable
-<tt class="docutils literal"><span class="pre">$HOME/lcoal/bin/python2.4</span></tt> is used to install a package, it will install it
-to the <tt class="docutils literal"><span class="pre">$HOME/local/</span></tt> directory structure.</p>
-<p>The python packages are fairly straightforward to install.  The process of
-installing packages in python has been greatly simplified over the last few
-years with the addition of setuptools, but for these particular packages I
-typically recommend installing from source, which for Python packages consists
-of changing to the source directory and issues the command:</p>
-<div class="highlight"><pre><span class="nv">$ </span>tar xvfz <span class="nv">$PKGNAME</span>.tar.gz
-<span class="nv">$ </span><span class="nb">cd</span> <span class="nv">$PKGNAME</span>
-<span class="nv">$ </span>python2.5 setup.py install
-</pre></div>
-<p>This method works for NumPy, Matplotlib and yt itself, but for wxPython, I
-<strong>strongly</strong> suggest you seek binaries for your platform.  If they are not
-available, I recommend you read the <tt class="docutils literal"><span class="pre">INSTALL</span></tt> file and follow its directions
-closely.</p>
-</div>
 </div>
 
 
@@ -133,8 +85,6 @@
 <li><a class="reference" href="">Introduction</a><ul>
 <li><a class="reference" href="#history">History</a></li>
 <li><a class="reference" href="#what-yt-is-and-is-not">What yt is and is not</a></li>
-<li><a class="reference" href="#prerequisites-for-yt">Prerequisites for yt</a></li>
-<li><a class="reference" href="#installing-the-necessary-packages">Installing the Necessary Packages</a></li>
 </ul>
 </li>
 </ul>
@@ -142,7 +92,7 @@
             <h4>Previous topic</h4>
             <p class="topless"><a href="index.html" title="previous chapter">yt Overview</a></p>
             <h4>Next topic</h4>
-            <p class="topless"><a href="tutorial/index.html" title="next chapter">A Short Tutorial</a></p>
+            <p class="topless"><a href="getting_started.html" title="next chapter">Getting Started</a></p>
             <h3>This Page</h3>
             <ul class="this-page-menu">
               <li><a href="_sources/intro.txt">Show Source</a></li>
@@ -162,7 +112,7 @@
       <ul>
         <li class="right" style="margin-right: 10px"><a href="genindex.html" title="General Index" accesskey="I">index</a></li>
         <li class="right"><a href="modindex.html" title="Global Module Index" accesskey="M">modules</a> |</li>
-          <li class="right"><a href="tutorial/index.html" title="A Short Tutorial" accesskey="N">next</a> |</li>
+          <li class="right"><a href="getting_started.html" title="Getting Started" accesskey="N">next</a> |</li>
           <li class="right"><a href="index.html" title="yt Overview" accesskey="P">previous</a> |</li>
     <li><a href="http://yt.enzotools.org/">yt</a> »</li>
     

Modified: trunk/doc/build/html/searchindex.json
==============================================================================
--- trunk/doc/build/html/searchindex.json	(original)
+++ trunk/doc/build/html/searchindex.json	Mon Jun 16 14:23:46 2008
@@ -1 +1 @@
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Quantities","Profiles","A Short Tutorial","Projections","A Demonstrative Example Script","FAQ","Basic Objects","Creating Datatypes","Derived Fields","Making Timeseries Plots","Creating Derived Fields","Automated Plotting","Making Simple Plots","Getting Started","Advanced Objects","Data 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\ No newline at end of file

Modified: trunk/doc/build/html/tutorial/index.html
==============================================================================
--- trunk/doc/build/html/tutorial/index.html	(original)
+++ trunk/doc/build/html/tutorial/index.html	Mon Jun 16 14:23:46 2008
@@ -19,7 +19,7 @@
     <link rel="search" title="Search" href="../search.html" />
     <link rel="top" title="yt v0.3-pre documentation" href="../index.html" />
     <link rel="next" title="Cookbook" href="../cookbook/index.html" />
-    <link rel="prev" title="Introduction" href="../intro.html" />
+    <link rel="prev" title="Getting Started" href="../getting_started.html" />
   </head>
   <body>
     <div class="related">
@@ -28,7 +28,7 @@
         <li class="right" style="margin-right: 10px"><a href="../genindex.html" title="General Index" accesskey="I">index</a></li>
         <li class="right"><a href="../modindex.html" title="Global Module Index" accesskey="M">modules</a> |</li>
           <li class="right"><a href="../cookbook/index.html" title="Cookbook" accesskey="N">next</a> |</li>
-          <li class="right"><a href="../intro.html" title="Introduction" accesskey="P">previous</a> |</li>
+          <li class="right"><a href="../getting_started.html" title="Getting Started" accesskey="P">previous</a> |</li>
     <li><a href="http://yt.enzotools.org/">yt</a> »</li>
     
         <li><a href="../index.html">yt v0.3-pre documentation</a> »</li>
@@ -117,7 +117,7 @@
       <div class="sidebar">
         <div class="sidebarwrapper">
             <h4>Previous topic</h4>
-            <p class="topless"><a href="../intro.html" title="previous chapter">Introduction</a></p>
+            <p class="topless"><a href="../getting_started.html" title="previous chapter">Getting Started</a></p>
             <h4>Next topic</h4>
             <p class="topless"><a href="../cookbook/index.html" title="next chapter">Cookbook</a></p>
             <h3>This Page</h3>
@@ -140,7 +140,7 @@
         <li class="right" style="margin-right: 10px"><a href="../genindex.html" title="General Index" accesskey="I">index</a></li>
         <li class="right"><a href="../modindex.html" title="Global Module Index" accesskey="M">modules</a> |</li>
           <li class="right"><a href="../cookbook/index.html" title="Cookbook" accesskey="N">next</a> |</li>
-          <li class="right"><a href="../intro.html" title="Introduction" accesskey="P">previous</a> |</li>
+          <li class="right"><a href="../getting_started.html" title="Getting Started" accesskey="P">previous</a> |</li>
     <li><a href="http://yt.enzotools.org/">yt</a> »</li>
     
         <li><a href="../index.html">yt v0.3-pre documentation</a> »</li>

Added: trunk/doc/source/getting_started.rst
==============================================================================
--- (empty file)
+++ trunk/doc/source/getting_started.rst	Mon Jun 16 14:23:46 2008
@@ -0,0 +1,103 @@
+===============
+Getting Started
+===============
+
+Maintained Installations
+========================
+
+As of right now, I maintain an installation of yt on several machines.  I try
+to keep them up to date with the stable branch.
+
+DataStar (SDSC)
+---------------
+
+To use yt on 
+`DataStar <http://www.sdsc.edu/us/resources/datastar/>`_,
+you need to ensure you are using the correct
+installation of Python 2.4 and the correct set of python packages.  In my
+.bashrc I have:
+
+.. code-block:: bash
+
+   export PATH=/usr/local/apps/python_2.4.2_64/bin:$PATH
+   export PYTHONPATH=/users/stanford/mturk/local/lib/python2.4/site-packages/
+
+which ensures that you are using my installation of yt and the correct, 64-bit
+global installation of Python2.4.
+
+Orange and Red (SLAC)
+---------------------
+
+To use yt on `Orange <http://kipac.stanford.edu/collab/computing/hardware/orange>`_
+or `Red <http://www.sgi.com/company_info/newsroom/press_releases/2005/april/space_sciences.html>`_
+you have to set your pythonpath appropriately.  I have created a script called
+'pywrapper.sh' that sets up your PATH, PYTHONPATH and LD_LIBRARY_PATH.
+
+.. code-block:: bash
+
+   $ export ARCH_PATH="/u/ki/mturk/ki12/`uname -p`_local/"
+   $ $ARCH_PATH/bin/pywrapper.sh my_script.py
+
+where my_script.py is the script you wish to run.
+
+Binary Packages
+===============
+
+Installing From Source
+======================
+
+Prerequisites for yt
+--------------------
+
+A driving factor in the development of yt over the months leading to release
+0.3 has been the reduction of dependencies.  To that extent, only a few
+packages are required for the base usage, and a GUI toolkit if you are going to use
+the graphical user interface, Reason.
+
+ * `Python <http://python.org/>`_, at least version 2.4, but preferably 2.5.
+ * `HDF5 <http://www.hdfgroup.org/>`_, the data storage backend used by Enzo
+   and yt (if you can run Enzo, this is already installed!)
+ * `NumPy <http://numpy.scipy.org/>`_, the fast numerical backend for Python
+ * `MatPlotLib <http://matplotlib.sf.net/>`_, the plotting package
+ * `wxPython <http://www.wxpython.org/>`_, the GUI toolkit
+
+(If you are only interested in manipulating data without any graphical plotting
+or interfaces, you only need to install NumPy and Python!)
+
+Installing the Necessary Packages
+---------------------------------
+
+Installing Python itself is usually quite simple, and often very fast.  Because
+we're setting up a small system of packages, even if you have a system-wide
+install of python2.5 it can be easier in some cases to create a local directory
+structure:
+
+.. code-block:: bash
+
+   $ tar xvf Python-2.5.2.tar.gz
+   $ cd Python-2.5.2
+   $ ./configure --prefix=$HOME/local/
+   $ make install
+
+This will create (if necessary) a directory named local in your home directory,
+along with the necessary subdirectories.  When the executable
+``$HOME/lcoal/bin/python2.4`` is used to install a package, it will install it
+to the ``$HOME/local/`` directory structure.
+
+The python packages are fairly straightforward to install.  The process of
+installing packages in python has been greatly simplified over the last few
+years with the addition of setuptools, but for these particular packages I
+typically recommend installing from source, which for Python packages consists
+of changing to the source directory and issues the command:
+
+.. code-block:: bash
+
+   $ tar xvfz $PKGNAME.tar.gz
+   $ cd $PKGNAME
+   $ python2.5 setup.py install
+
+This method works for NumPy, Matplotlib and yt itself, but for wxPython, I
+**strongly** suggest you seek binaries for your platform.  If they are not
+available, I recommend you read the ``INSTALL`` file and follow its directions
+closely.
+

Modified: trunk/doc/source/index.rst
==============================================================================
--- trunk/doc/source/index.rst	(original)
+++ trunk/doc/source/index.rst	Mon Jun 16 14:23:46 2008
@@ -10,6 +10,7 @@
    :maxdepth: 2
 
    intro
+   getting_started
    tutorial/index
    cookbook/index
    extending/index

Modified: trunk/doc/source/intro.rst
==============================================================================
--- trunk/doc/source/intro.rst	(original)
+++ trunk/doc/source/intro.rst	Mon Jun 16 14:23:46 2008
@@ -32,61 +32,3 @@
 mitigated by a cleverness of algorithms and a substantially improved
 development time for the user in the case of a desire to expand the
 functionality.
-
-```EXPAND```
-
-Prerequisites for yt
---------------------
-
-A driving factor in the development of yt over the months leading to release
-0.3 has been the reduction of dependencies.  To that extent, only a few
-packages are required for the base usage, and a GUI toolkit if you are going to use
-the graphical user interface, Reason.
-
- * `Python <http://python.org/>`_, at least version 2.4, but preferably 2.5.
- * `HDF5 <http://www.hdfgroup.org/>`_, the data storage backend used by Enzo
-   and yt (if you can run Enzo, this is already installed!)
- * `NumPy <http://numpy.scipy.org/>`_, the fast numerical backend for Python
- * `MatPlotLib <http://matplotlib.sf.net/>`_, the plotting package
- * `wxPython <http://www.wxpython.org/>`_, the GUI toolkit
-
-(If you are only interested in manipulating data without any graphical plotting
-or interfaces, you only need to install NumPy and Python!)
-
-Installing the Necessary Packages
----------------------------------
-
-Installing Python itself is usually quite simple, and often very fast.  Because
-we're setting up a small system of packages, even if you have a system-wide
-install of python2.5 it can be easier in some cases to create a local directory
-structure:
-
-.. code-block:: bash
-
-   $ tar xvf Python-2.5.2.tar.gz
-   $ cd Python-2.5.2
-   $ ./configure --prefix=$HOME/local/
-   $ make install
-
-This will create (if necessary) a directory named local in your home directory,
-along with the necessary subdirectories.  When the executable
-``$HOME/lcoal/bin/python2.4`` is used to install a package, it will install it
-to the ``$HOME/local/`` directory structure.
-
-The python packages are fairly straightforward to install.  The process of
-installing packages in python has been greatly simplified over the last few
-years with the addition of setuptools, but for these particular packages I
-typically recommend installing from source, which for Python packages consists
-of changing to the source directory and issues the command:
-
-.. code-block:: bash
-
-   $ tar xvfz $PKGNAME.tar.gz
-   $ cd $PKGNAME
-   $ python2.5 setup.py install
-
-This method works for NumPy, Matplotlib and yt itself, but for wxPython, I
-**strongly** suggest you seek binaries for your platform.  If they are not
-available, I recommend you read the ``INSTALL`` file and follow its directions
-closely.
-