Wed Jun 4 12:19:49 PDT 2008

Author: mturk
Date: Wed Jun  4 12:19:41 2008
New Revision: 531
URL: http://yt.spacepope.org/changeset/531

Log:

Removed SciPy dependencies and set all of the directories to ignore .pyc files.



Modified:
   /   (props changed)
   branches/   (props changed)
   tags/   (props changed)
   tags/release-0.2/   (props changed)
   tags/release-0.2.1/   (props changed)
   tags/release-0.2.1/doc/   (props changed)
   tags/release-0.2.1/examples/   (props changed)
   tags/release-0.2.1/scripts/   (props changed)
   tags/release-0.2.1/src/   (props changed)
   tags/release-0.2.1/src/deliverator/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator.egg-info/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator/catwalk-session/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator/config/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator/generated/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator/sqlobject-history/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator/static/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator/static/css/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator/static/images/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator/static/javascript/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator/templates/   (props changed)
   tags/release-0.2.1/src/deliverator/deliverator/tests/   (props changed)
   tags/release-0.2.1/src/enki/   (props changed)
   tags/release-0.2.1/src/enki/mes/   (props changed)
   tags/release-0.2.1/src/fido/   (props changed)
   tags/release-0.2.1/src/lagos/   (props changed)
   tags/release-0.2.1/src/raven/   (props changed)
   tags/release-0.2.1/src/raven/backends/   (props changed)
   tags/release-0.2.1/src/raven/deliveration/   (props changed)
   tags/release-0.2.1/src/reason/   (props changed)
   tags/release-0.2.1/tests/   (props changed)
   tags/release-0.2.2/   (props changed)
   tags/release-0.2.2/doc/   (props changed)
   tags/release-0.2.2/examples/   (props changed)
   tags/release-0.2.2/scripts/   (props changed)
   tags/release-0.2.2/tests/   (props changed)
   tags/release-0.2.2/yt/   (props changed)
   tags/release-0.2.2/yt/deliverator/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator.egg-info/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator/catwalk-session/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator/config/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator/generated/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator/sqlobject-history/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator/static/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator/static/css/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator/static/images/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator/static/javascript/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator/templates/   (props changed)
   tags/release-0.2.2/yt/deliverator/deliverator/tests/   (props changed)
   tags/release-0.2.2/yt/enki/   (props changed)
   tags/release-0.2.2/yt/enki/mes/   (props changed)
   tags/release-0.2.2/yt/fido/   (props changed)
   tags/release-0.2.2/yt/lagos/   (props changed)
   tags/release-0.2.2/yt/raven/   (props changed)
   tags/release-0.2.2/yt/raven/backends/   (props changed)
   tags/release-0.2.2/yt/raven/deliveration/   (props changed)
   tags/release-0.2.2/yt/reason/   (props changed)
   tags/release-0.2/doc/   (props changed)
   tags/release-0.2/examples/   (props changed)
   tags/release-0.2/scripts/   (props changed)
   tags/release-0.2/src/   (props changed)
   tags/release-0.2/src/enki/   (props changed)
   tags/release-0.2/src/enki/mes/   (props changed)
   tags/release-0.2/src/fido/   (props changed)
   tags/release-0.2/src/lagos/   (props changed)
   tags/release-0.2/src/raven/   (props changed)
   tags/release-0.2/src/raven/backends/   (props changed)
   tags/release-0.2/src/raven/deliveration/   (props changed)
   tags/release-0.2/src/reason/   (props changed)
   tags/release-0.2/tests/   (props changed)
   trunk/   (props changed)
   trunk/doc/   (props changed)
   trunk/doc/build/   (props changed)
   trunk/doc/build/doctrees/   (props changed)
   trunk/doc/build/doctrees/cookbook/   (props changed)
   trunk/doc/build/doctrees/cookbook/index.doctree
   trunk/doc/build/doctrees/environment.pickle
   trunk/doc/build/doctrees/extending/   (props changed)
   trunk/doc/build/doctrees/extending/creating_derived_fields.doctree
   trunk/doc/build/doctrees/modules/   (props changed)
   trunk/doc/build/doctrees/modules/lagos/   (props changed)
   trunk/doc/build/doctrees/modules/raven/   (props changed)
   trunk/doc/build/doctrees/modules/reason/   (props changed)
   trunk/doc/build/doctrees/tutorial/   (props changed)
   trunk/doc/build/html/   (props changed)
   trunk/doc/build/html/_sources/   (props changed)
   trunk/doc/build/html/_sources/cookbook/   (props changed)
   trunk/doc/build/html/_sources/cookbook/index.txt
   trunk/doc/build/html/_sources/extending/   (props changed)
   trunk/doc/build/html/_sources/extending/creating_derived_fields.txt
   trunk/doc/build/html/_sources/modules/   (props changed)
   trunk/doc/build/html/_sources/modules/lagos/   (props changed)
   trunk/doc/build/html/_sources/modules/raven/   (props changed)
   trunk/doc/build/html/_sources/modules/reason/   (props changed)
   trunk/doc/build/html/_sources/tutorial/   (props changed)
   trunk/doc/build/html/_static/   (props changed)
   trunk/doc/build/html/cookbook/   (props changed)
   trunk/doc/build/html/cookbook/index.html
   trunk/doc/build/html/extending/   (props changed)
   trunk/doc/build/html/extending/creating_derived_fields.html
   trunk/doc/build/html/extending/index.html
   trunk/doc/build/html/genindex.html
   trunk/doc/build/html/index.html
   trunk/doc/build/html/modindex.html
   trunk/doc/build/html/modules/   (props changed)
   trunk/doc/build/html/modules/lagos/   (props changed)
   trunk/doc/build/html/modules/raven/   (props changed)
   trunk/doc/build/html/modules/reason/   (props changed)
   trunk/doc/build/html/search.html
   trunk/doc/build/html/searchindex.json
   trunk/doc/build/html/tutorial/   (props changed)
   trunk/doc/source/   (props changed)
   trunk/doc/source/.static/   (props changed)
   trunk/doc/source/.templates/   (props changed)
   trunk/doc/source/cookbook/   (props changed)
   trunk/doc/source/cookbook/index.rst
   trunk/doc/source/extending/   (props changed)
   trunk/doc/source/extending/creating_derived_fields.rst
   trunk/doc/source/modules/   (props changed)
   trunk/doc/source/modules/lagos/   (props changed)
   trunk/doc/source/modules/raven/   (props changed)
   trunk/doc/source/modules/reason/   (props changed)
   trunk/doc/source/tutorial/   (props changed)
   trunk/epydoc.cfg
   trunk/examples/   (props changed)
   trunk/scripts/   (props changed)
   trunk/tests/   (props changed)
   trunk/tests/DD0000/   (props changed)
   trunk/tests/DD0010/   (props changed)
   trunk/tests/regression_scripts/   (props changed)
   trunk/yt/   (props changed)
   trunk/yt/arraytypes.py
   trunk/yt/deliverator/   (props changed)
   trunk/yt/deliverator/deliverator/   (props changed)
   trunk/yt/deliverator/deliverator.egg-info/   (props changed)
   trunk/yt/deliverator/deliverator/catwalk-session/   (props changed)
   trunk/yt/deliverator/deliverator/config/   (props changed)
   trunk/yt/deliverator/deliverator/generated/   (props changed)
   trunk/yt/deliverator/deliverator/sqlobject-history/   (props changed)
   trunk/yt/deliverator/deliverator/static/   (props changed)
   trunk/yt/deliverator/deliverator/static/css/   (props changed)
   trunk/yt/deliverator/deliverator/static/images/   (props changed)
   trunk/yt/deliverator/deliverator/static/javascript/   (props changed)
   trunk/yt/deliverator/deliverator/templates/   (props changed)
   trunk/yt/deliverator/deliverator/tests/   (props changed)
   trunk/yt/enki/   (props changed)
   trunk/yt/enki/mes/   (props changed)
   trunk/yt/fido/   (props changed)
   trunk/yt/lagos/   (props changed)
   trunk/yt/raven/   (props changed)
   trunk/yt/raven/delaunay/   (props changed)
   trunk/yt/raven/deliveration/   (props changed)
   trunk/yt/reason/   (props changed)

Modified: trunk/doc/build/doctrees/cookbook/index.doctree
==============================================================================
Binary files. No diff available.

Modified: trunk/doc/build/doctrees/environment.pickle
==============================================================================
Binary files. No diff available.

Modified: trunk/doc/build/doctrees/extending/creating_derived_fields.doctree
==============================================================================
Binary files. No diff available.

Modified: trunk/doc/build/html/_sources/cookbook/index.txt
==============================================================================

--- trunk/doc/build/html/_sources/cookbook/index.txt	(original)
+++ trunk/doc/build/html/_sources/cookbook/index.txt	Wed Jun  4 12:19:41 2008
@@ -0,0 +1,20 @@
+Cookbook
+========
+
+yt scripts can be a bit intimidating, and at times a bit obtuse.  But there's a
+lot you can do, and this section of the manual will assist with figuring out
+how to do some fairly common tasks -- which can lead to combining these, with
+other Python code, into more complicated and advanced tasks.
+
+.. note::
+   All of these scripts assume that you have imported the standard yt modules.
+
+.. toctree::
+   :maxdepth: 2
+
+   making_simple_plots
+   analyzing_data
+   grouping_data
+   making_movies
+   making_timeseries_plots
+   extracting_data

Modified: trunk/doc/build/html/_sources/extending/creating_derived_fields.txt
==============================================================================
--- trunk/doc/build/html/_sources/extending/creating_derived_fields.txt	(original)
+++ trunk/doc/build/html/_sources/extending/creating_derived_fields.txt	Wed Jun  4 12:19:41 2008
@@ -1,2 +1,4 @@
 Creating Derived Fields
 =======================
+
+Derived fields are one of the more powerful ways in which you can extend yt.

Modified: trunk/doc/build/html/cookbook/index.html
==============================================================================
--- trunk/doc/build/html/cookbook/index.html	(original)
+++ trunk/doc/build/html/cookbook/index.html	Wed Jun  4 12:19:41 2008
@@ -2,7 +2,7 @@
   "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd"><html xmlns="http://www.w3.org/1999/xhtml">
   <head>
     <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
-    <title> — yt v0.3 documentation</title>
+    <title>Cookbook — yt v0.3 documentation</title>
     <link rel="stylesheet" href="../_static/default.css" type="text/css" />
     <link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
     <script type="text/javascript">
@@ -41,7 +41,37 @@
           <div class="body">
             
   
-  
+  <div class="section">
+<h1 id="cookbook">Cookbook<a class="headerlink" href="#cookbook" title="Permalink to this headline">¶</a></h1>
+<p>yt scripts can be a bit intimidating, and at times a bit obtuse.  But there’s a
+lot you can do, and this section of the manual will assist with figuring out
+how to do some fairly common tasks – which can lead to combining these, with
+other Python code, into more complicated and advanced tasks.</p>
+<div class="admonition note">
+<p class="first admonition-title">Note</p>
+<p class="last">All of these scripts assume that you have imported the standard yt modules.</p>
+</div>
+<ul>
+<li><a class="reference" href="making_simple_plots.html">Making Simple Plots</a><ul>
+<li><a class="reference" href="making_simple_plots.html#single-width-plots">Single Width Plots</a></li>
+<li><a class="reference" href="making_simple_plots.html#multiple-fields-single-width">Multiple Fields Single Width</a></li>
+<li><a class="reference" href="making_simple_plots.html#single-field-multiple-widths">Single Field Multiple Widths</a></li>
+<li><a class="reference" href="making_simple_plots.html#multiple-fields-multiple-widths">Multiple Fields Multiple Widths</a></li>
+</ul>
+</li>
+</ul>
+<ul class="simple">
+</ul>
+<ul class="simple">
+</ul>
+<ul class="simple">
+</ul>
+<ul class="simple">
+</ul>
+<ul class="simple">
+</ul>
+</div>
+
 
           </div>
         </div>
@@ -81,7 +111,7 @@
     </div>
     <div class="footer">
       © Copyright 2008, Matthew Turk.
-      Last updated on May 09, 2008.
+      Last updated on May 14, 2008.
     </div>
   </body>
 </html>
\ No newline at end of file

Modified: trunk/doc/build/html/extending/creating_derived_fields.html
==============================================================================
--- trunk/doc/build/html/extending/creating_derived_fields.html	(original)
+++ trunk/doc/build/html/extending/creating_derived_fields.html	Wed Jun  4 12:19:41 2008
@@ -45,6 +45,7 @@
   
   <div class="section">
 <h1 id="creating-derived-fields">Creating Derived Fields<a class="headerlink" href="#creating-derived-fields" title="Permalink to this headline">¶</a></h1>
+<p>Derived fields are one of the more powerful ways in which you can extend yt.</p>
 </div>
 
 
@@ -87,7 +88,7 @@
     </div>
     <div class="footer">
       © Copyright 2008, Matthew Turk.
-      Last updated on May 09, 2008.
+      Last updated on May 14, 2008.
     </div>
   </body>
 </html>
\ No newline at end of file

Modified: trunk/doc/build/html/extending/index.html
==============================================================================
--- trunk/doc/build/html/extending/index.html	(original)
+++ trunk/doc/build/html/extending/index.html	Wed Jun  4 12:19:41 2008
@@ -19,6 +19,7 @@
     <link rel="search" title="Search" href="../search.html" />
     <link rel="top" title="yt v0.3 documentation" href="../index.html" />
     <link rel="next" title="FAQ" href="../faq.html" />
+    <link rel="prev" title="Cookbook" href="../cookbook/index.html" />
   </head>
   <body>
     <div class="related">
@@ -27,6 +28,7 @@
         <li class="right" style="margin-right: 10px"><a href="../genindex.html" title="General Index" accesskey="I">index</a></li>
         <li class="right"><a href="../modindex.html" title="Global Module Index" accesskey="M">modules</a> |</li>
           <li class="right"><a href="../faq.html" title="FAQ" accesskey="N">next</a> |</li>
+          <li class="right"><a href="../cookbook/index.html" title="Cookbook" accesskey="P">previous</a> |</li>
     <li><a href="http://yt.spacepope.org/">yt</a> »</li>
     
         <li><a href="../index.html">yt v0.3 documentation</a> »</li>
@@ -74,6 +76,8 @@
       </div>
       <div class="sidebar">
         <div class="sidebarwrapper">
+            <h4>Previous topic</h4>
+            <p class="topless"><a href="../cookbook/index.html" title="previous chapter">Cookbook</a></p>
             <h4>Next topic</h4>
             <p class="topless"><a href="../faq.html" title="next chapter">FAQ</a></p>
             <h3>This Page</h3>
@@ -96,6 +100,7 @@
         <li class="right" style="margin-right: 10px"><a href="../genindex.html" title="General Index" accesskey="I">index</a></li>
         <li class="right"><a href="../modindex.html" title="Global Module Index" accesskey="M">modules</a> |</li>
           <li class="right"><a href="../faq.html" title="FAQ" accesskey="N">next</a> |</li>
+          <li class="right"><a href="../cookbook/index.html" title="Cookbook" accesskey="P">previous</a> |</li>
     <li><a href="http://yt.spacepope.org/">yt</a> »</li>
     
         <li><a href="../index.html">yt v0.3 documentation</a> »</li>
@@ -104,7 +109,7 @@
     </div>
     <div class="footer">
       © Copyright 2008, Matthew Turk.
-      Last updated on May 09, 2008.
+      Last updated on May 14, 2008.
     </div>
   </body>
 </html>
\ No newline at end of file

Modified: trunk/doc/build/html/genindex.html
==============================================================================
--- trunk/doc/build/html/genindex.html	(original)
+++ trunk/doc/build/html/genindex.html	Wed Jun  4 12:19:41 2008
@@ -272,7 +272,7 @@
     </div>
     <div class="footer">
       © Copyright 2008, Matthew Turk.
-      Last updated on May 10, 2008.
+      Last updated on May 14, 2008.
     </div>
   </body>
 </html>
\ No newline at end of file

Modified: trunk/doc/build/html/index.html
==============================================================================
--- trunk/doc/build/html/index.html	(original)
+++ trunk/doc/build/html/index.html	Wed Jun  4 12:19:41 2008
@@ -65,7 +65,11 @@
 </ul>
 </li>
 </ul>
-<ul class="simple">
+<ul>
+<li><a class="reference" href="cookbook/index.html">Cookbook</a><ul>
+<li><a class="reference" href="cookbook/making_simple_plots.html">Making Simple Plots</a></li>
+</ul>
+</li>
 </ul>
 <ul>
 <li><a class="reference" href="extending/index.html">Extending yt</a><ul>
@@ -156,7 +160,7 @@
     </div>
     <div class="footer">
       © Copyright 2008, Matthew Turk.
-      Last updated on May 10, 2008.
+      Last updated on May 14, 2008.
     </div>
   </body>
 </html>
\ No newline at end of file

Modified: trunk/doc/build/html/modindex.html
==============================================================================
--- trunk/doc/build/html/modindex.html	(original)
+++ trunk/doc/build/html/modindex.html	Wed Jun  4 12:19:41 2008
@@ -83,7 +83,7 @@
     </div>
     <div class="footer">
       © Copyright 2008, Matthew Turk.
-      Last updated on May 10, 2008.
+      Last updated on May 14, 2008.
     </div>
   </body>
 </html>
\ No newline at end of file

Modified: trunk/doc/build/html/search.html
==============================================================================
--- trunk/doc/build/html/search.html	(original)
+++ trunk/doc/build/html/search.html	Wed Jun  4 12:19:41 2008
@@ -76,7 +76,7 @@
     </div>
     <div class="footer">
       © Copyright 2008, Matthew Turk.
-      Last updated on May 10, 2008.
+      Last updated on May 14, 2008.
     </div>
   </body>
 </html>
\ No newline at end of file

Modified: trunk/doc/build/html/searchindex.json
==============================================================================
--- trunk/doc/build/html/searchindex.json	(original)
+++ trunk/doc/build/html/searchindex.json	Wed Jun  4 12:19:41 2008
@@ -1 +1 @@
-[["tutorial/derived_quantities","extending/writing_scripts","modules/lagos/outputandhierarchy","index","tutorial/example_script","extending/using_the_interpreter","modules/lagos/index","extending/analyzing_in_parallel","tutorial/automated_plotting","extending/creating_derived_quantities","tutorial/profiles","intro","tutorial/index","tutorial/projections","extending/index","faq","tutorial/basic_objects","extending/creating_datatypes","tutorial/derived_fields","extending/creating_derived_fields","extending/plugin_file","extending/running_fortran_routines","tutorial/getting_started","tutorial/advanced_objects","modules/lagos/basedatatypes"],["Derived Quantities","Writing Scripts","Native Enzo Data Structures","yt Overview","A Demonstrative Example Script","Using the Interpreter","yt.lagos - Data Handling and Analysis","Analyzing in Parallel","Automated Plotting","Creating Derived Quantities","Profiles","Introduction","A Short Tutorial","Projections","Extending yt","FAQ","Basic Objects","Creating Datatypes","Derived Fields","Creating Derived Fields","The Plugin File","Running Fortran Routines","Getting Started","Advanced Objects","Data Containers"],{"all":[3,15,22,16,23,24,18,10,2,8],"code":[3,11,15,16,23,24,18,10,2],"entropi":[16],"edg":[16,2],"orthogon":[24],"consum":[13],"gz":[11],"month":[11],"rapid":[15],"prefix":[11,8],"numtocheck":[],"ga":[23],"go":[3,15,11,8,22],"follow":[12,11],"disk":[24],"children":[],"my_profil":[10],"locat":[22,2,24],"whose":[24],"hold":[2],"depend":[11],"auspic":[11],"zone":[24,18],"electron_fract":[18],"tt":[],"send":[15],"to":[3,13,14,12,11,15,22,16,23,24,18,4,10,2,8],"tracker":[15],"ylabel":[10],"sens":[11],"get_field_paramet":[24],"digit":[15],"sourc":[24,16,23,11,18],"everi":[24,18],"mpc":[23,8],"straightforward":[11],"far":[15],"triangul":[],"faq":[3,15],"outputfil":[],"uncl":[15],"endpoint":[],"mechan":[22],"indispens":[15],"govern":[18],"veri":[16,11,13,18],"kiloparsec":[8],"ticket":[15],"exact":[16],"relev":[2],"fourth":[],"cool":[15,23],"wa":[16,23,11],"dim":[24],"level":[24,2],"did":[16],"gui":[11],"fakegridforparticl":[24],"list":[15,23,24],"datadump0036":[22],"iter":[24],"try":[16,8],"vector":[23,24],"small":[11,24],"particularli":[15],"prepar":[23,24],"dir":[22],"pleas":[15],"upper":[10],"repres":[15,24],"flush_data":[24],"fortun":[22],"natur":[24],"eas":[11],"direct":[11,24,13],"d":[15,24],"second":[15,23],"pressur":[16],"video":[15],"pass":[16,24],"rectangular":[16,24],"add_slic":[4,8],"even":[10,23,11,13],"index":[3,16,2,24,8],"what":[3,15,22,16,23,18,10,11],"section":[15],"abl":[22],"calcul":[16],"uniform":[24],"access":[13,15,22,16,24,18,10,2,8],"version":[15,11],"_densitycub":[18],"new":[15,23,24,16],"method":[15,22,23,24,10,11],"loglog":[10],"3d":[23,24,6],"manag":[3],"full":[13],"deriv":[3,14,12,16,0,24,18,9,19],"absolut":[15],"got":[8],"gener":[13,15,22,16,11,24,18,10,2],"learn":[3,15],"here":[13,22,16,23,24,18,10],"satisfi":[24],"met":[15],"shouldn":[22],"electron_dens":[18],"obliqu":[24],"inher":[22],"path":[],"along":[13,15,11,24,10,2,8],"becom":[18],"accessor":[23],"valu":[24,22,10,2,16],"intersect":[2],"box":[16],"clear_al":[2],"search":[3],"convers":[10,18],"ahead":[15],"hdf5":[11,13],"shift":[16,24],"amount":[],"behav":[23],"action":[24],"studi":[11,24],"portabl":[15],"extract_connected_set":[24],"love":[15],"prerequisit":[3,11,22],"binned2dprofil":[23],"appli":[23],"modul":[3,22],"prefer":[11],"avenu":[15],"filenam":[15,2,8],"boolean":[],"instal":[3,11,13,22],"unit":[4,22,23,24,18,10,2,8],"plot":[3,13,12,16,23,24,10,11,8],"fed":[23],"done":[15,23,24,16],"from":[3,11,15,16,23,24,18,10,2,8],"describ":[24,23,2],"would":[23,24],"memori":[24,10,2],"leftedg":[2],"univers":[11],"two":[12,13,15,22,23,18,10],"next":[15,23,13],"implic":[16],"few":[11],"handler":[22],"call":[13,22,24,18,2,8],"recommend":[15,11],"clear_data":[24],"use_pbar":[24],"type":[16,23,24,18,10,2],"tell":[10,18],"more":[3,12,15,16,23,24,18,10,2,8],"thetutorialtop":[],"clever":[11],"desir":[11],"averageddens":[18],"ti":[13],"it":[13,4,11,15,22,16,23,24,18,10,2,8],"visual":[11],"indic":[3,12,16,23,24,2],"autodoc":[],"particular":[24,11,2],"91":[15],"enzocuttingplanebas":[24],"unpack":[22],"easiest":[15],"me":[15],"none":[24,10,2],"graphic":[11],"setup":[11],"work":[12,16,11,4,22],"uniqu":[23],"histori":[3,11],"kunz":[11],"itself":[22,11,24],"whatev":[23],"v":[22,4],"under":[15,11],"purpos":[22,24],"my":[3,15,11,4],"def":[18],"appropri":[24,23,2,13],"control":[22,10,18],"nearest":[24],"quickstart":[],"tar":[11],"give":[22,15],"process":[22,11,2,8,18],"staticoutput":[22],"virtu":[11],"share":[15,24],"datafil":[2],"accept":[24,18],"topic":[24],"sphere":[24,10,23,2,16],"minimum":[2],"proprietari":[11],"unavail":[15],"explor":[15],"log_spac":[24],"serial":[15],"simul":[2,4],"string":[15,2,18],"alwai":[16,2,18],"cours":[15,11,4],"multipl":[15,24],"goal":[24],"divid":[10,24],"rather":[11],"cylind":[24],"travel":[],"get":[3,12,15,22,16,23,24,10,2,8],"id":[2],"1":[4,15,16,23,18,10,2,8],"how":[3,15,22,16,23,24,10,8],"confin":[24],"partiview":[2],"subdirectori":[11],"answer":[15],"turk":[11],"simpl":[12,13,15,22,23,18,10,11],"collaps":[23],"minimumt":[23],"y":[24,16,15,2],"overridden":[24],"max":[24],"dive":[15],"after":[8],"lab":[11],"walk":[12],"befor":[24,2],"wrong":[3,15],"mesh":[3,11],"okai":[16,18],"mai":[],"end":[23],"data":[3,4,12,11,15,6,22,16,23,24,18,10,2,8],"parallel":[3,12,13,14,7],"averag":[10],"matthewturk":[22],"a":[3,13,4,12,11,15,22,16,23,24,18,10,2,8],"sy":[4],"short":[3,12],"attempt":[24,15,2],"read":[24,16,11,2],"quot":[],"explicit":[],"processor":[13],"caus":[15,13],"inform":[24,15,23,2,8],"cannot":[24,13],"so":[12,13,15,22,16,23,24,18,10,8],"spheric":[10],"allow":[15,18],"volum":[10,15],"1000":[4],"order":[10,24,4,8],"beazlei":[15],"__":[22],"origin":[24,23,11],"cutting_plan":[23],"frontend":[11],"help":[3,16,15],"softwar":[11,13],"offici":[15],"move":[24,2],"becaus":[11,13,18],"galaxi":[23],"graduat":[11],"_python":[],"paper":[15],"through":[12,23,24,10,11,8],"affect":[24],"hierarchi":[12,13,15,22,16,2,8],"still":[8],"paramet":[13,15,22,24,2,8],"24":[10],"25":[23],"style":[24],"le":[24],"group":[8],"readparameterfil":[],"matthew":[11],"lo":[11],"get_sourc":[16],"platform":[11],"particle_typ":[2],"onc":[10,13],"comprehens":[11],"mail":[15],"main":[18],"might":[22,18],"pixel":[24],"connection_pool":[24],"then":[13,22,16,23,24,18,8],"them":[13,15,22,23,24,10,8],"good":[22,15],"return":[22,2,24,18],"greater":[23],"thei":[13,15,16,23,24,18,10,11,8],"python":[3,15,11,22],"spell":[],"handi":[22],"initi":[24],"number":[24,10,15,16,13],"framework":[11],"47":[],"clear_derived_quant":[2],"not":[3,12,11,15,22,16,23,24,18,2],"now":[15,22,16,23,18,10,8],"yt":[3,13,14,12,11,15,6,22,16,23,24,4,2,8],"introduct":[3,11],"interest":[15,22,23,10,11,8],"name":[3,15,22,11,24,18,2],"parameterfil":[2],"anyth":[10,18],"drop":[15],"l":[2],"galaxytwo":[23],"2d":[24,6],"easili":[16],"achiev":[24],"kpc":[10,8],"each":[10,23,24,4,8],"fulli":[23,11],"tracer":[23],"mean":[22,23,18],"subset":[23,2],"domain":[16],"export_boxes_pv":[2],"somename_15kpc":[8],"replac":[24],"individu":[10],"blank":[],"idea":[8],"realli":[22,16],"field_paramet":[24],"gird":[2],"expect":[],"year":[11],"our":[22,16,23,24,18,10],"energi":[11],"patch":[15],"extract":[12,10,23],"reduct":[11],"out":[15,22,16,23,24,2],"variabl":[10,18],"has_field_paramet":[24],"freedom":[11],"accomplish":[13],"space":[10],"open":[15],"develop":[15,11],"crucial":[18],"research":[22],"morpholog":[13],"re":[24,15,23,11],"_convertdensitycub":[18],"adapt":[3,11],"rel":[15],"reader":[11],"print":[15,22,16,18,10,2,8],"rm":[10,18],"forth":[16,24],"sphinx":[],"math":[15,18],"integr":[13],"linear":[11],"insid":[16,15],"advanc":[3,23,12],"manipul":[22,11,8],"given":[24,2,13],"free":[24,15,11],"reason":[11],"base":[15,6,23,11,24,2,8],"believ":[11],"dictionari":[24],"usual":[11,24],"ask":[22,15,13],"org":[15],"indexboundari":[2],"initialdt":[],"bash":[],"care":[8],"driven":[13],"indent":[],"val":[24],"g":[10,18],"launch":[22],"angl":[24],"could":[10,23],"traceback":[15],"keep":[4],"filter":[2],"thing":[22,16,15,24,18],"length":[10,8],"plane":[12,13,16,23,24,8],"place":[15,24],"due":[24],"w":[4],"view":[24,2],"onto":[24],"think":[2],"first":[13,15,22,23,18,10,2,8],"oper":[16,24],"dimens":[10,23],"rang":[4],"finest":[24],"export_particles_pb":[2],"suffix":[8],"directli":[24,22,10,2,16],"famou":[24],"arrai":[23,2],"refin":[3,11],"scene":[23],"yourself":[22],"restrict":[3,15,24],"email":[15],"1e2":[10],"1e5":[10],"messag":[15],"divv":[18],"slower":[10,11],"facil":[8],"angular":[23],"size":[2],"lazy_read":[10],"differ":[22,10,8],"my_region":[16,18],"script":[12,14,4,3,16,1],"hierarchytyp":[],"unknown":[],"interact":[12],"system":[15,23,11],"least":[11],"paint":[24],"cumul":[24],"1e":[10,23],"demonstr":[3,4,12],"statement":[23],"tom":[11],"master":[15],"conveni":[22],"enzogrid":[2],"easier":[22,11,8],"friend":[22,16],"too":[23,18],"my_width":[4],"option":[24,10,2],"enzocuttingplan":[24],"that":[12,13,4,11,15,22,16,23,24,18,10,2,8],"namespac":[22],"baryon":[24],"tool":[8],"copi":[15],"setuptool":[11],"specifi":[3,15,24],"max_val":[24],"base_region":[24],"part":[8,18],"pars":[22,2],"enzoproj":[24],"mostli":[23,11],"conserv":[10],"alreadi":[24,23,11,13,18],"necessarili":[24],"find_point":[2],"than":[24,23,11],"png":[10,8],"wide":[11,13],"liter":[],"gal1_region":[23],"15":[8],"keyword":[2],"16":[10],"provid":[15,24],"basenam":[],"rightedg":[2],"prof2d":[10],"structur":[3,11,2,24,6],"min_val":[24],"project":[3,13,12,15,16,24,8],"i":[3,13,4,15,22,11,24,8],"r":[10,18],"xlabel":[10],"store":[22,13],"entri":[14],"posit":[24,2],"design":[3,11,14],"fields_to_plot":[4],"thu":[15,24],"seri":[2],"pre":[16,23,8],"analysi":[3,15,11,4,6],"sai":[23],"behavior":[15,18],"terribl":[24],"ani":[3,15,23,24,10,11,8],"enzocoveringgrid":[24],"packag":[3,11,13,12],"my_val":[4],"have":[13,4,15,22,16,23,24,18,10,11,8],"tabl":[3],"need":[15,22,16,23,24,18,10,11],"seen":[16,23],"get_smallest_dx":[2],"their":[24],"sat":[],"issu":[11],"engin":[13],"relationship":[15],"messeng":[15],"weight_field":[24,13,8],"latter":[23],"h2i_fract":[4,8],"snow":[15],"add_cutting_plan":[23],"for":[3,13,4,11,15,22,16,23,24,18,10,2,8],"note":[13,22,23,24,18,10,2,8],"also":[15,22,16,23,18,11,8],"discret":[],"take":[22,10,24,8],"which":[11,15,22,23,24,18,10,2],"numberdens":[4],"combin":[15],"singl":[2,13,8],"simplifi":[11],"begin":[22],"unless":[24],"distribut":[10,13],"normal":[23,24],"multipli":[24],"who":[],"most":[24,8,18],"plugin":[3,20,14],"frih":[],"extractedregion":[24],"homepag":[15],"the":[3,13,14,12,11,5,15,22,16,23,24,20,18,4,10,2,8],"num_ghost_zon":[24],"todo":[2],"don":[16,8,18],"alright":[10],"clear":[24,2],"later":[16,8],"request":[18],"drive":[11],"km":[8],"doe":[24,16,2],"fiel":[18],"derivedfield":[18],"determin":[22,23],"axi":[3,13,15,16,24,2,8],"someth":[3,15,13,22],"fact":[11,18],"has_kei":[24],"somewhat":[11],"show":[22],"text":[2,8],"radiu":[24,10,2],"radii":[24],"enzodata":[24],"underlin":[],"find":[22,15],"ground":[11],"current":[24],"onli":[13,15,23,16,11,24,18],"inlin":[22],"print_stat":[2,4],"pkgname":[11],"pretti":[22,16,18],"true":[24,10,2],"enzoregionbas":[24],"releas":[15,11],"3":[4,15,23,24,18,10,11],"should":[2,18],"configur":[15,11],"analyz":[3,11,14,7],"factor":[24,10,11,2],"local":[22,11],"over":[11,24],"meant":[22],"do":[3,13,15,22,16,23,24,18,10],"cube":[18],"contribut":[15,23],"unind":[],"there":[3,13,15,23,24,18,10,8],"between":[24,15,2],"autom":[3,8,12],"enzo1ddata":[24],"nativ":[3,2,6],"galaxyon":[23],"dx":[22],"report":[15],"2":[24,16,15,11,8],"plotcollect":[4,8],"requir":[24,15,11,18],"radiuskpc":[10],"reveal":[13],"enabl":[11,24],"organ":[8],"h":[13,4,22,16,23,10],"convert_funct":[18],"stanford":[11],"paint_grid":[24],"coord":[24,2],"public":[15],"default":[22,15,24,8],"float":[24,2],"stuff":[22,16,18],"common":[12],"contain":[3,6,23,24,2,8],"x":[24,16,15,2],"grab":[22,10,16,8],"xvf":[11],"where":[3,15,23,24,18,10,8],"baryonfield":[23],"commod":[11],"happen":[18],"enzostaticoutput":[22,2,24,4],"set":[15,22,11,24,18,2,8],"primari":[11,24],"right_edg":[24],"set_field_paramet":[24],"maximum":[22,2],"datatyp":[3,24,17,8,14],"see":[15,23,24,18,10,2],"result":[16,15],"enzospherebas":[24],"arg":[],"close":[11],"contour":[24],"particl":[24,2],"get_enzo_grid":[2],"flexibl":[14],"extend":[3,15,11,14],"speed":[15],"boundari":[],"exist":[24,16,2,8],"below":[24,4],"label":[],"figur":[15],"smallest":[2],"simplest":[13],"import":[22,10,23,4,8],"neither":[10],"1d":[24,6],"across":[15,13],"attribut":[22,24],"enzoslicebas":[24],"we":[12,11,22,16,23,24,18,10,2,8],"never":[24,2],"bound":[10],"kei":[24,2,18],"web":[15],"numer":[11],"_densiti":[18],"hdf4":[],"extens":[11],"entir":[16,15,24],"data_styl":[2],"matplotlib":[10,11],"extent":[11],"come":[16],"popul":[23],"both":[24],"c":[22,15,11],"z":[16,15,2],"rsun":[4],"add_field":[10,18],"howev":[13,23,24,18,10,11,8],"immers":[11],"such":[15,24],"enzooutput":[],"s":[3,13,4,15,22,16,23,24,18,10,2,8],"tutori":[22,3,15,24,12],"datafield":[2],"logic":[24],"improv":[15,11],"idt_val":[],"extract_region":[23,24],"fix":[16,24],"load":[22,10,2],"and":[3,13,4,12,11,15,6,22,16,23,24,18,10,2,8],"acceler":[11],"simpli":[2,13],"cm":[10,8,18],"point":[24,23,2,14],"8211":[],"overview":[3],"format":[2],"cg":[24,18],"switch_field":[4],"8217":[],"height":[24],"arbitrarili":[24],"na":[],"written":[11],"littl":[8],"suppli":[24,23,2,8],"guid":[15],"assum":[22],"100":[4],"backend":[15,11],"quit":[11],"ultim":[24],"three":[24,18],"coupl":[16,15,18],"my_slic":[16],"addition":[10,15],"py":[11],"numpi":[11,15,23,2],"compos":[18],"been":[11,15,23,2,14],"sinc":[15],"pb":[2],"pc":[4,23,13,8],"beer":[11],"much":[15,13,8],"pf":[24,2,4],"interpret":[3,14,5,15,22,16,11],"untouch":[24],"modif":[24],"addit":[11,8],"my_grid":[22,16],"remaind":[24],"0001":[10],"spit":[16],"xvfz":[11],"resolut":[16,24,13],"logspac":[],"convert":[10,24,18],"argument":[24],"coordin":[24,16,23,2],"understand":[8],"child":[15,24],"last":[10,11,18],"rai":[2],"densitycub":[18],"those":[22,10,24,8],"case":[24,15,11,13],"extractedregionbas":[24],"ident":[23],"look":[22,10,2,16],"gnu":[15],"these":[3,13,15,23,24,18,10,11],"enzogridbas":[2],"align":[24],"properti":[22,8],"can":[3,13,12,15,22,16,23,24,18,10,11,8],"mpi4pi":[13],"will":[13,11,15,22,23,24,18,10,2,8],"defin":[12,16,23,24,18],"while":[8],"ar":[3,13,15,22,16,23,24,18,10,11,8],"abov":[10,8],"error":[15,2],"basegridtyp":[],"invoc":[15],"spacepop":[15],"binnedprofile2d":[10],"num_level":[24],"pack":[22],"argv":[4],"ve":[15,23,16,4,8],"cell":[24,2],"stdout":[2],"best":[15],"is":[3,13,4,11,15,22,16,23,24,18,10,2,8],"side":[24],"toolkit":[3,11],"cluster":[24],"kwarg":[24],"default_valu":[24],"substanti":[11],"in":[3,13,14,11,15,7,22,16,23,24,18,4,10,2,8],"fn":[4],"crash":[15],"inspector":[16],"exntes":[15],"attach":[15],"sever":[15,13,14],"if":[11,15,22,16,23,24,2,8],"parent":[15,2],"subscrib":[15],"proport":[24],"let":[22,15,23,16,8],"welcom":[],"author":[11],"perform":[12],"suggest":[11],"make":[22,10,15,11],"save_data":[2],"0":[13,4,11,15,22,16,23,24,18,10,2,8],"same":[16,23,24,18,10,8],"slac":[11],"member":[24],"binari":[11],"epoch":[15],"instanc":[24,2,8],"9":[18],"grid_list":[24],"document":[],"start":[3,12,15,22,16,23],"pan":[13],"complet":[11],"enzoprojbas":[24],"http":[15],"find_max":[22,2],"again":[10],"max_level":[24],"indices_we_w":[23],"activedimens":[22],"fairli":[23,11],"001":[23],"rais":[16],"user":[22,15,11],"mani":[12,16,15,24],"extern":[22],"nation":[11],"typic":[16,11,24],"expand":[11],"built":[16,11],"cellmass":[13,8],"lower":[10],"task":[12,13,4],"off":[22,15],"center":[23,16,11,24,10,2],"my_unit":[4],"com":[15],"markup":[],"enzocylinderbas":[24],"well":[15,23,16],"inherit":[24],"without":[24,11,2],"thought":[24],"exampl":[3,4,12,23,18,10],"command":[22,15,23,11],"thi":[12,11,15,22,16,23,24,18,10,2],"interpol":[24],"undefin":[],"particle_index":[2],"everyth":[23,18],"utilitarian":[11],"dimension":[12,10,24],"left":[24,16,2],"explan":[10,18],"enzo":[11,3,15,2,6],"book":[15],"distanc":[],"protocol":[24,18],"just":[22,16,23,2,18],"savefig":[10],"pylab":[10],"obtain":[24],"select_grid":[24,2],"select":[24,4],"via":[24,2],"behind":[15,23],"touch":[22],"depart":[11],"paul":[11],"32":[10],"cellvolum":[10],"bit":[12,10],"languag":[11],"mandat":[24],"cut":[12,13,16,23,24,8],"slicer":[15],"easi":[16,15],"mix":[23],"except":[24],"param":[2],"snag":[],"identif":[15],"instanti":[22,10,23,2],"add":[10,8],"valid":[18],"4":[24,16,23,11],"gal1_mix":[23],"timestep":[],"reslic":[24],"els":[22],"save":[2,4,8],"momentum":[15,23],"raven":[4,15,23,13,8],"bin":[10,11],"applic":[15],"around":[16,8],"enzo2ddata":[24],"mayb":[16,2,8],"handl":[3,6],"big":[10],"swig":[2],"piec":[15],"temperatur":[13,4,22,23,10,8],"grid":[12,15,22,16,23,24,18,10,2],"know":[22,16,15,24,8],"mip":[],"mitig":[11],"herarchi":[16],"cd":[11],"associ":[24,8],"licens":[15],"python2":[22,11],"insert":[24],"pure":[11],"like":[16,23,24,13],"specif":[15],"arbitrari":[24,2,13],"docutil":[],"seek":[11],"delaunai":[],"manual":[22,8],"zoom":[13],"integ":[15,24],"collect":[12,15,23,8],"a5basenam":[],"pcolormesh":[10],"t":[22,16,15,8,18],"region":[12,16,23,24,18,10,2],"output":[15,2,4],"export_amira":[],"page":[3],"right":[22,15,23,2,16],"often":[16,11,4],"deal":[24,13],"creation":[15,18],"some":[12,11,15,22,16,23,18,10,2,8],"back":[24,10,2,16],"10":[16,4],"finestlevel":[2],"wxpython":[11],"export":[11,2],"act":[24,8],"toctre":[],"root":[22],"showmedo":[15],"guess":[23,24],"librari":[11],"basic":[3,16,24,12],"slice":[12,13,16,23,24,18,2,8],"implement":[11,24],"find_sphere_grid":[2],"alamo":[11],"support":[3,15],"though":[16,15],"definit":[22],"per":[15],"evolv":[11],"proj":[13],"prof":[10,11],"content":[3,15,12],"complic":[12,18],"either":[22,15,24],"be":[12,13,14,11,15,22,23,24,18,10,2],"plu":[18],"object":[3,13,12,15,22,16,23,24,18,10,2,8],"run":[3,21,11,4,14],"power":[24,18],"add_project":[13,8],"inspect":[10],"usag":[11],"_fraction":[18],"presuppos":[23],"left_edg":[24],"although":[16,11],"found":[15],"keeper":[15],"by":[13,11,15,22,16,23,24,10,2],"_":[22],"on":[3,13,4,12,11,15,16,23,24,18,10,2,8],"about":[3,15,16,23,18,2],"greatli":[11],"get_posit":[2],"transpos":[10],"of":[3,13,4,12,11,15,22,16,23,24,18,10,2,8],"cellmassmsun":[10],"datadir0036":[22],"currenttimeidentifi":[15],"child_indic":[2],"degre":[],"ll":[12,10],"neighbor":[24],"basedatatyp":[],"fals":[15],"discard":[24],"or":[11,15,22,23,24,18,10,2,8],"block":[8],"routin":[3,21,14],"feed":[10,23,16,8],"doubl":[15],"enzorun":[2],"primarili":[2],"h2":[10],"compil":[15],"into":[12,15,22,23,24,10,11],"within":[24,16,2],"daunt":[12],"automat":[24,13,8,18],"dataset":[24,2],"down":[24,2],"strip":[2],"enzohierarchi":[2],"chang":[24,10,15,11],"abel":[11],"child_mask":[2],"storag":[11],"your":[22,16,15,11,18],"necessari":[3,11],"enzogridcollect":[24],"span":[],"weight":[10,24,13],"wai":[12,13,15,22,16,23,18,8],"execut":[11],"themat":[8],"question":[16],"transform":[23],"fast":[11,18],"why":[3,15],"avail":[13,15,23,24,18,11],"width":[8],"reli":[11],"lago":[3,4,15,6,22,16,24,18,10,2],"interfac":[11,23,2,8],"includ":[24,4,8,18],"fraction":[10],"get_box_grid":[2],"strict":[18],"function":[24,23,11,18],"reduc":[11,24],"an":[3,13,11,15,22,16,23,24,18,10,2],"add_threephase_spher":[8],"unexpect":[],"enough":[16],"tupl":[22,24],"criteria":[23],"keyerror":[24],"but":[15,22,16,11,24,18,10,8],"taken":[15],"hi":[],"own":[16,18],"lcoal":[11],"line":[10,23,13,15],"ha":[3,14,15,22,11,24,18,2,8],"with":[3,13,14,12,11,15,22,16,23,24,18,10,2,8],"bug":[15],"faster":[10],"info":[16],"commun":[15],"throw":[24,2],"made":[15,24],"fortran":[3,21,14],"input":[24],"consist":[11],"possibl":[],"whether":[10,23],"autoclass":[],"displai":[23],"us":[3,13,14,12,11,5,15,22,16,23,24,18,2],"lead":[15,11],"record":[15],"scipi":[],"bonus":[2],"sum":[24],"otherwis":[24,2],"problem":[15,23,13],"enzo3ddata":[24],"initialize_enzo_interfac":[],"connect":[24],"basic_objet":[],"gone":[3,15],"6":[],"featur":[11],"ad":[12,2,8],"creat":[3,4,14,11,15,23,17,24,18,9,10,2,19,8],"up":[3,15,22,23,24,18,11],"int":[2],"cover":[10,24],"dure":[23,11,4],"interpolate_discret":[24],"am":[11],"doesn":[],"enzoorthoraybas":[24],"strongli":[11],"as":[12,13,4,11,15,22,16,23,24,18,2,8],"hippodraw":[11],"binnedprofile1d":[10],"at":[15,23,22,11,24,10,2],"file":[3,13,14,15,22,16,11,20,2,8],"home":[11],"ax":[16,15,8],"find_slice_grid":[2],"quantiti":[3,13,14,12,0,24,9],"check":[24,15,2,18],"probabl":[15],"incorrect":[15],"tab":[4],"collid":[23],"want":[22,16,23,10,2,8],"no":[24,11,2],"find_min":[2],"titl":[],"get_data":[24,2],"when":[23,11,8,18],"field":[3,4,14,12,22,16,23,24,18,10,2,19,8],"prism":[16,24],"other":[16,23,24,13,18],"5":[22,10,23,11,16],"futur":[15],"varieti":[13],"test":[16],"you":[13,11,15,22,16,23,18,10,2,8],"mock":[24],"architectur":[15],"node":[2,13],"draw":[24],"relat":[],"star":[2],"findmax":[2],"affili":[2],"knew":[15],"enzoregion":[24],"m":[22],"densiti":[4,22,16,23,24,18,10,8],"increas":[11],"class":[24,2],"meaning":[15],"scale":[24,2],"log":[10,15],"consid":[24],"intepret":[12],"au":[4,8],"ghost":[24,18],"receiv":[23],"set_width":[4,8],"enzoslic":[24,8],"algorithm":[11],"scientif":[15],"directori":[11],"suit":[15],"lot":[15,8,18],"find_ray_grid":[2],"discrimin":[],"write":[1,15,14,3],"u":[4],"time":[11,15,2,13,8],"push":[24],"fieldinfo":[16,18],"2008":[],"profil":[3,10,23,8,12],"stick":[18]}]
\ No newline at end of file
+[["extending/running_fortran_routines","cookbook/index","intro","extending/writing_scripts","modules/lagos/outputandhierarchy","index","extending/index","extending/using_the_interpreter","modules/lagos/index","extending/analyzing_in_parallel","tutorial/advanced_objects","tutorial/automated_plotting","extending/creating_derived_quantities","tutorial/profiles","tutorial/index","tutorial/projections","tutorial/example_script","faq","tutorial/basic_objects","extending/creating_datatypes","tutorial/derived_fields","extending/creating_derived_fields","extending/plugin_file","cookbook/making_simple_plots","tutorial/getting_started","tutorial/derived_quantities","modules/lagos/basedatatypes"],["Running Fortran Routines","Cookbook","Introduction","Writing Scripts","Native Enzo Data Structures","yt Overview","Extending yt","Using the Interpreter","yt.lagos - Data Handling and Analysis","Analyzing in Parallel","Advanced Objects","Automated Plotting","Creating Derived Quantities","Profiles","A Short Tutorial","Projections","A Demonstrative Example Script","FAQ","Basic Objects","Creating Datatypes","Derived Fields","Creating Derived Fields","The Plugin File","Making Simple Plots","Getting Started","Derived Quantities","Data Containers"],{"all":[5,17,1,24,18,10,26,20,13,4,11],"code":[5,17,1,10,18,2,26,20,13,4],"entropi":[18],"edg":[18,4],"orthogon":[26],"consum":[15],"gz":[2],"month":[2],"prefix":[2,11],"has_kei":[26],"per":[17],"ga":[10],"my_data0001_":[23],"go":[5,17,2,11,24],"follow":[14,23,2],"disk":[26],"children":[],"my_profil":[13],"whose":[26],"hold":[4],"depend":[2],"auspic":[2],"zone":[26,20],"doe":[26,18,4],"electron_fract":[20],"tt":[],"elsewher":[23],"send":[17],"to":[5,17,15,16,14,6,23,1,10,24,18,2,26,20,13,4,11],"evolv":[2],"titl":[],"ylabel":[13],"sens":[2],"proj":[15],"digit":[17],"sourc":[10,18,2,26,20],"everi":[26,20],"mpc":[23,11,10],"straightforward":[2],"far":[17],"triangul":[],"faq":[5,17],"outputfil":[],"print":[17,24,18,20,13,4,11],"endpoint":[],"mechan":[24],"radiu":[26,13,4],"govern":[20],"veri":[18,23,2,15,20],"kiloparsec":[11],"ticket":[17],"exact":[18],"relev":[4],"method":[17,10,24,2,26,13],"cool":[17,10],"recip":[23],"dim":[26],"level":[26,4],"did":[18],"gui":[2],"fakegridforparticl":[26],"list":[17,26,10],"datadump0036":[24],"iter":[26],"try":[18,11],"collect":[14,17,23,11,10],"vector":[10,26],"small":[2,26],"enzodata":[26],"prepar":[10,26],"dir":[24],"pleas":[17],"upper":[13],"flush_data":[26],"fortun":[24],"natur":[26],"dimens":[13,10],"direct":[2,26,15],"across":[17,15],"second":[17,10],"pressur":[18],"video":[17],"pass":[18,26],"mpi4pi":[15],"add_slic":[23,11,16],"even":[13,2,15,10],"index":[5,18,4,26,11],"what":[5,17,10,24,18,2,20,13],"section":[17,1],"abl":[24],"while":[11],"rm":[13,20],"uniform":[26],"access":[15,17,24,18,26,20,13,4,11],"version":[17,2],"_densitycub":[20],"new":[17,23,26,18,10],"public":[17],"loglog":[13],"3d":[10,26,8],"manag":[5],"full":[15],"deriv":[5,6,14,18,25,26,20,12,21],"compos":[20],"gener":[15,17,24,18,2,26,20,13,4],"learn":[5,17],"here":[15,23,24,18,10,26,20,13],"satisfi":[26],"met":[17],"shouldn":[24],"electron_dens":[20],"obliqu":[26],"inher":[24],"path":[],"along":[15,17,2,26,13,4,11],"becom":[20],"accessor":[10],"valu":[26,24,13,4,18],"box":[18],"clear_al":[4],"search":[5],"convers":[13,20],"ahead":[17],"hdf5":[2,15],"shift":[18,26],"current":[26],"amount":[],"behav":[10],"within":[26,18,4],"action":[26],"studi":[2,26],"portabl":[17],"extract_connected_set":[26],"love":[17],"although":[18,2],"binned2dprofil":[10],"appli":[23,10],"modul":[5,1,24],"prefer":[2],"avenu":[17],"filenam":[17,23,4,11],"boolean":[],"instal":[5,2,15,24],"unit":[16,23,24,10,26,20,13,4,11],"kei":[26,4,20],"plot":[5,15,14,23,1,10,18,2,26,13,11],"fed":[10],"done":[18,17,26,10],"from":[5,17,10,18,2,26,20,13,4,11],"describ":[26,10,4],"would":[10,26],"memori":[26,13,4],"leftedg":[4],"univers":[2],"two":[14,15,17,24,10,20,13],"next":[17,15,10],"implic":[18],"few":[23,2],"handler":[24],"call":[15,24,26,20,4,11],"recommend":[17,2],"clear_data":[26],"use_pbar":[26],"type":[18,10,26,20,13,4],"tell":[13,20],"more":[14,17,5,23,1,18,10,26,20,13,4,21,11],"thetutorialtop":[],"clever":[2],"desir":[2],"05i":[23],"averageddens":[20],"ti":[15],"line":[13,17,15,10],"toolkit":[5,2],"visual":[2],"indic":[5,14,18,10,26,4],"autodoc":[],"particular":[26,2,4],"91":[17],"enzocuttingplanebas":[26],"unpack":[24],"easiest":[17],"me":[17],"none":[26,13,4],"graphic":[2],"left":[26,18,4],"prof":[13,2],"setup":[2],"work":[14,18,2,16,24],"uniqu":[10],"histori":[5,2],"angl":[26],"kwarg":[26],"whatev":[10],"enzoslic":[26,11],"v":[24,16],"under":[17,2],"purpos":[24,26],"my":[5,17,2,16],"could":[13,10],"def":[20],"control":[24,13,20],"nearest":[26],"quickstart":[],"tar":[2],"give":[24,17],"process":[24,2,4,11,20],"staticoutput":[24],"mayb":[18,4,11],"in":[5,17,15,16,6,23,9,24,18,2,26,20,13,10,4,21,11],"share":[17,26],"datafil":[4],"accept":[26,20],"topic":[26],"sphere":[26,13,10,4,18],"minimum":[4],"proprietari":[2],"unavail":[17],"explor":[17],"log_spac":[26],"serial":[17],"child_indic":[4],"string":[17,4,20],"alwai":[18,4,20],"cours":[17,2,16],"end":[10],"goal":[26],"divid":[13,26],"rather":[2],"cylind":[26],"travel":[],"get":[5,14,17,24,18,10,26,13,4,11],"1":[17,16,23,18,10,20,13,4,11],"how":[5,17,1,24,18,10,26,13,11],"confin":[26],"partiview":[4],"subdirectori":[2],"answer":[17],"place":[17,26],"simpl":[5,17,15,14,23,1,10,24,2,20,13],"collaps":[10],"minimumt":[10],"overridden":[26],"max":[26],"dive":[17],"after":[11],"lab":[2],"walk":[14],"befor":[26,4],"wrong":[5,17],"mesh":[5,2],"okai":[18,20],"contribut":[17,10],"mai":[],"multipl":[26,17,23,1],"data":[5,16,14,17,8,10,24,18,2,26,20,13,4,11],"parallel":[5,14,15,6,9],"averag":[13],"welcom":[],"a":[5,17,15,16,14,23,1,10,24,18,2,26,20,13,4,11],"sy":[16],"short":[5,14],"attempt":[26,17,4],"interpol":[26],"quot":[],"explicit":[],"or":[17,10,24,2,26,20,13,4,11],"caus":[17,15],"inform":[26,17,4,11,10],"switch":[23],"galaxyon":[10],"so":[14,15,17,24,18,10,26,20,13,11],"spheric":[13],"allow":[17,20],"volum":[13,17],"first":[15,17,24,10,20,13,4,11],"order":[13,26,11,16],"beazlei":[17],"__":[24],"oper":[18,26],"frontend":[2],"help":[5,18,17],"intimid":[1],"offici":[17],"move":[26,4],"becaus":[23,2,15,20],"galaxi":[10],"graduat":[2],"_python":[],"paper":[17],"through":[14,10,2,26,13,11],"affect":[26],"hierarchi":[14,15,17,24,18,4,11],"enzorun":[4],"still":[11],"vari":[23],"paramet":[23,15,17,24,26,4,11],"24":[13],"25":[10],"style":[26],"le":[26],"group":[11],"directli":[26,24,13,4,18],"matthew":[2],"lo":[2],"get_sourc":[18],"platform":[2],"particle_typ":[4],"famou":[26],"comprehens":[2],"mail":[17],"of":[5,17,15,16,14,23,1,10,24,18,2,26,20,13,4,21,11],"main":[20],"might":[24,20],"pixel":[26],"connection_pool":[26],"then":[15,23,24,18,10,26,20,11],"them":[15,17,24,10,26,13,11],"good":[24,17],"return":[24,4,26,20],"greater":[10],"thei":[15,17,10,18,2,26,20,13,11],"python":[5,17,2,1,24],"spell":[],"handi":[24],"initi":[26],"scene":[10],"framework":[2],"clear_derived_quant":[4],"not":[5,14,17,10,24,18,2,26,20,4],"inspect":[13],"now":[17,24,18,10,20,13,11],"yt":[5,17,15,16,14,6,23,1,8,10,24,18,2,26,4,21,11],"introduct":[5,2],"interest":[17,24,10,13,2,11],"name":[5,23,17,24,2,26,20,4],"parameterfil":[4],"anyth":[13,20],"drop":[17],"l":[4],"galaxytwo":[10],"2d":[26,8],"easili":[18,23],"achiev":[26],"kpc":[13,23,11],"each":[13,10,26,11,16],"fulli":[2,10],"tracer":[10],"mean":[24,10,20],"subset":[10,4],"domain":[18],"transform":[10],"export_boxes_pv":[4],"somename_15kpc":[11],"replac":[26],"individu":[13],"blank":[],"idea":[11],"realli":[24,18],"field_paramet":[26],"enzohierarchi":[4],"gird":[4],"expect":[],"year":[2],"into":[14,17,23,1,10,24,2,26,13],"our":[23,24,18,10,26,20,13],"energi":[2],"extract":[14,13,10],"reduct":[2],"out":[17,1,24,18,10,26,4],"variabl":[13,20],"has_field_paramet":[26],"architectur":[17],"accomplish":[15],"space":[13],"facil":[11],"ha":[5,6,17,24,2,26,20,4,11],"crucial":[20],"research":[24],"morpholog":[15],"re":[17,2,26,10],"_convertdensitycub":[20],"adapt":[5,2],"rel":[17],"reader":[2],"uncl":[17],"got":[11],"forth":[18,26],"math":[17,20],"common":[14,1],"dataset":[26,4],"linear":[2],"insid":[18,17],"advanc":[5,10,1,14],"manipul":[24,2,11],"differ":[24,13,23,11],"free":[17,2,26],"standard":[1],"cut":[14,15,18,10,26,11],"reason":[2],"base":[17,8,10,2,26,4,11],"believ":[2],"dictionari":[26],"ask":[24,17,15],"org":[17],"relat":[],"indexboundari":[4],"initialdt":[],"bash":[],"care":[11],"activedimens":[24],"indent":[],"wai":[14,23,15,17,24,18,10,20,21,11],"g":[13,20],"launch":[24],"kunz":[2],"veloc":[23],"traceback":[17],"keep":[16],"filter":[4],"thing":[23,17,24,18,26,20],"length":[13,11],"plane":[14,15,18,10,26,11],"turk":[2],"w":[23,16],"my_data":[23],"commod":[2],"onto":[26],"think":[4],"1000":[23,16],"origin":[2,26,10],"softwar":[2,15],"rang":[16],"finest":[26],"export_particles_pb":[4],"suffix":[11],"readparameterfil":[],"onc":[13,15],"arrai":[10,4],"number":[26,13,17,18,15],"yourself":[24],"restrict":[5,17,26],"1e2":[13],"1e5":[13],"least":[2],"divv":[20],"slower":[13,2],"stick":[20],"open":[17,23],"angular":[10],"fanci":[23],"size":[4],"lazy_read":[13],"given":[26,4,15],"my_region":[18,20],"script":[14,16,6,5,1,18,3],"hierarchytyp":[],"unknown":[],"interact":[14],"system":[17,2,10],"messag":[17],"paint":[26],"cumul":[26],"1e":[13,10],"demonstr":[5,16,14],"making_movi":[],"tom":[2],"master":[17],"conveni":[24],"enzogrid":[4],"easier":[24,2,11],"friend":[24,18],"too":[10,23,20],"attach":[17],"my_width":[16],"option":[26,13,4],"enzocuttingplan":[26],"that":[14,17,15,16,23,1,10,24,18,2,26,20,13,4,11],"namespac":[24],"baryon":[26],"tool":[11],"copi":[17],"setuptool":[2],"specifi":[5,17,26],"task":[14,1,15,16],"max_val":[26],"base_region":[26],"part":[11,20],"pars":[24,4],"enzoproj":[26],"mostli":[2,10],"conserv":[13],"alreadi":[10,2,26,15,20],"necessarili":[26],"find_point":[4],"than":[26,23,2,10],"png":[13,11],"wide":[2,15],"liter":[],"gal1_region":[10],"15":[11],"keyword":[4],"16":[13],"provid":[17,26],"rightedg":[4],"prof2d":[13],"structur":[5,2,4,26,8],"min_val":[26],"project":[5,15,14,17,18,26,11],"my_unit":[16],"r":[13,20],"xlabel":[13],"store":[24,15],"entri":[6],"posit":[26,4],"design":[5,2,6],"other":[15,1,18,10,26,20],"markup":[],"seri":[4],"pre":[18,10,11],"function":[10,2,26,20],"sai":[10],"abov":[13,11],"terribl":[26],"ani":[5,17,10,26,13,2,11],"enzocoveringgrid":[26],"packag":[5,2,15,14],"width":[23,1,11],"my_val":[16],"have":[17,15,16,23,1,10,24,18,2,26,20,13,11],"tabl":[5],"need":[17,10,24,18,2,26,20,13],"seen":[18,10],"get_smallest_dx":[4],"their":[26],"sat":[],"issu":[2],"engin":[15],"relationship":[17],"messeng":[17],"check":[26,17,4,20],"weight_field":[26,15,11],"latter":[10],"h2i_fract":[11,16],"snow":[17],"add_cutting_plan":[10],"note":[15,23,1,24,10,26,20,13,4,11],"also":[17,10,24,18,2,20,11],"discret":[],"take":[24,13,26,11],"which":[17,23,1,10,24,2,26,20,13,4,21],"numberdens":[16],"combin":[17,1],"properti":[24,11],"singl":[4,23,1,15,11],"simplifi":[2],"begin":[24],"unless":[26],"distribut":[13,15],"normal":[10,26],"multipli":[26],"who":[],"most":[23,26,11,20],"frih":[],"scipi":[],"extractedregion":[26],"homepag":[17],"everyth":[10,20],"num_ghost_zon":[26],"todo":[4],"don":[18,11,20],"binari":[2],"clear":[26,4],"later":[18,11],"cover":[13,26],"drive":[2],"km":[11],"quantiti":[5,15,6,14,25,26,12],"themat":[11],"declar":[23],"fiel":[20],"derivedfield":[20],"determin":[24,10],"axi":[5,15,17,18,26,4,11],"boundari":[],"fact":[2,20],"criteria":[10],"numtocheck":[],"somewhat":[2],"show":[24],"text":[4,11],"indispens":[17],"radii":[26],"particularli":[17],"underlin":[],"find":[24,17],"ground":[2],"absolut":[17],"onli":[15,17,18,10,26,20,2],"inlin":[24],"locat":[24,4,26],"pkgname":[2],"pretti":[24,18,20],"with":[5,17,15,6,14,23,1,10,24,18,2,26,20,13,4,11],"enzoregionbas":[26],"releas":[17,2],"figur":[17,1],"should":[4,20],"like":[18,10,26,15],"configur":[17,2],"analyz":[5,2,6,9],"factor":[26,13,2,4],"local":[24,2],"over":[26,23,2],"meant":[24],"do":[5,17,15,23,1,24,18,10,26,20,13],"cube":[20],"intersect":[4],"unind":[],"timestep":[],"simplest":[23,15],"autom":[5,11,14],"nativ":[5,4,8],"cannot":[26,15],"dx":[24],"report":[17],"2":[23,17,18,2,26,11],"requir":[17,2,26,20],"radiuskpc":[13],"reveal":[15],"enabl":[2,26],"organ":[11],"my_data0001":[23],"h":[15,16,24,18,10,13],"convert_funct":[20],"possibl":[],"paint_grid":[26],"coord":[26,4],"patch":[17],"whether":[13,10],"stuff":[24,18,20],"integr":[15],"though":[18,17],"contain":[5,8,10,26,4,11],"x":[26,17,23,4,18],"grab":[24,13,18,11],"attribut":[24,26],"where":[5,17,10,26,20,13,11],"baryonfield":[10],"view":[26,4],"enzostaticoutput":[24,23,4,26,16],"set":[23,17,24,2,26,20,4,11],"right_edg":[26],"set_field_paramet":[26],"displai":[10],"datatyp":[5,26,19,11,6],"see":[17,10,26,20,13,4],"result":[18,17],"enzospherebas":[26],"arg":[],"close":[2],"improv":[17,2],"contour":[26],"particl":[26,4],"get_enzo_grid":[4],"flexibl":[6],"wa":[18,2,10],"cellvolum":[13],"someth":[5,17,15,24],"exist":[26,18,4,11],"below":[26,16],"label":[],"3":[16,17,10,26,20,13,2],"smallest":[4],"between":[26,17,4],"import":[16,1,24,10,13,11],"neither":[13],"1d":[26,8],"email":[17],"xvf":[2],"we":[14,23,10,24,18,2,26,20,13,4,11],"never":[26,4],"extend":[5,17,2,21,6],"mandat":[26],"numer":[2],"exampl":[5,16,14,10,20,13],"either":[24,17,26],"hdf4":[],"extens":[2],"entir":[18,17,26],"data_styl":[4],"matplotlib":[13,2],"extent":[2],"outer":[23],"making_timeseries_plot":[],"let":[24,18,17,11,10],"come":[18],"popul":[10],"both":[26],"c":[24,17,2],"enzo3ddata":[26],"rsun":[16],"add_field":[13,20],"howev":[15,10,26,20,13,2,11],"immers":[2],"such":[17,26],"enzooutput":[],"s":[5,17,15,16,23,1,24,18,10,26,20,13,4,11],"tutori":[24,5,17,26,14],"datafield":[4],"logic":[26],"mani":[14,18,17,26],"idt_val":[],"extract_region":[10,26],"fix":[18,23,26],"load":[24,13,4],"and":[5,17,15,16,14,23,1,8,10,24,18,2,26,20,13,4,11],"acceler":[2],"simpli":[23,4,15],"undefin":[],"cm":[13,11,20],"point":[26,10,4,6],"8211":[],"overview":[5],"cg":[26,20],"switch_field":[23,16],"8217":[],"height":[26],"arbitrarili":[26],"na":[],"written":[2],"param":[4],"suppli":[26,10,4,11],"guid":[17],"assum":[24,1],"100":[23,16],"backend":[17,2],"quit":[2],"ultim":[26],"creat":[5,17,6,16,23,10,2,19,26,20,12,13,4,21,11],"coupl":[18,17,20],"my_slic":[18],"addition":[13,17],"py":[2],"numpi":[17,2,4,10],"due":[26],"been":[17,2,4,6,10],"sinc":[17],"pb":[4],"pc":[11,23,15,16,10],"beer":[2],"much":[17,15,11],"pf":[26,23,4,16],"interpret":[5,6,7,17,24,18,2],"untouch":[26],"modif":[26],"addit":[2,11],"my_grid":[24,18],"field":[5,6,16,14,23,1,24,18,10,26,20,13,4,21,11],"0001":[13],"spit":[18],"xvfz":[2],"resolut":[18,26,15],"logspac":[],"convert":[13,26,20],"analyzing_data":[],"argument":[26],"coordin":[26,18,10,4],"understand":[11],"child":[17,26],"last":[13,2,20],"rai":[4],"densitycub":[20],"those":[24,13,26,11],"case":[17,2,26,15],"strongli":[2],"ident":[10],"look":[24,13,4,18],"gnu":[17],"these":[5,15,17,1,10,2,26,20,13],"enzogridbas":[4],"align":[26],"plugin":[5,6,22],"can":[5,17,15,14,23,1,10,24,18,2,26,20,13,21,11],"rectangular":[18,26],"will":[15,17,1,10,24,2,26,20,13,4,11],"defin":[14,23,18,10,26,20],"calcul":[18],"behavior":[17,20],"error":[17,4],"basegridtyp":[],"invoc":[17],"raven":[23,15,16,17,10,11],"binnedprofile2d":[13],"loop":[23],"pack":[24],"argv":[16],"ve":[18,17,11,16,10],"cell":[26,4],"stdout":[4],"is":[5,17,15,16,23,10,24,18,2,26,20,13,4,11],"side":[26],"it":[17,15,16,23,10,24,18,2,26,20,13,4,11],"cluster":[26],"itself":[24,2,26],"default_valu":[26],"substanti":[2],"virtu":[2],"fn":[16],"crash":[17],"inspector":[18],"exntes":[17],"id":[4],"sever":[17,15,6],"if":[17,10,24,18,2,26,4,11],"parent":[17,4],"develop":[17,2],"matthewturk":[24],"author":[2],"perform":[14],"suggest":[2],"make":[5,17,23,1,24,2,13],"save_data":[4],"0":[17,15,16,23,10,24,18,2,26,20,13,4,11],"same":[18,10,26,20,13,11],"slac":[2],"member":[26],"handl":[5,23,8],"epoch":[17],"instanc":[26,4,11],"9":[20],"grid_list":[26],"document":[],"start":[5,14,17,24,18,10],"pan":[15],"complet":[2],"enzoprojbas":[26],"http":[17],"find_max":[24,4],"max_level":[26],"assist":[1],"indices_we_w":[10],"driven":[15],"fairli":[2,1,10],"001":[10],"rais":[18],"user":[24,17,2],"refin":[5,2],"extern":[24],"nation":[2],"typic":[18,2,26],"expand":[2],"built":[18,2],"cellmass":[15,11],"lower":[13],"appropri":[26,10,4,15],"off":[24,17],"center":[10,18,2,26,13,4],"push":[26],"i":[5,15,16,17,24,2,26,11],"com":[17],"thu":[17,23,26],"enzocylinderbas":[26],"well":[18,17,10],"inherit":[26],"thought":[26],"without":[26,2,4],"command":[24,17,23,2,10],"thi":[14,17,1,10,24,18,2,26,20,13,4],"enzo1ddata":[26],"y":[26,18,17,4],"particle_index":[4],"the":[5,17,15,16,14,6,7,23,1,10,24,18,2,26,11,20,13,4,21,22],"utilitarian":[2],"dimension":[14,13,26],"usual":[2,26],"explan":[13,20],"enzo":[5,17,2,4,8],"distanc":[],"protocol":[26,20],"just":[24,18,10,4,20],"savefig":[13],"hippodraw":[2],"pylab":[13],"obtain":[26],"select_grid":[26,4],"select":[26,16],"via":[26,4],"behind":[17,10],"touch":[24],"depart":[2],"paul":[2],"32":[13],"speed":[17],"herarchi":[18],"languag":[2],"web":[17],"rapid":[17],"slicer":[17],"easi":[18,17],"mix":[10],"except":[26],"littl":[11],"snag":[],"identif":[17],"instanti":[24,13,10,4],"add":[13,23,11],"valid":[20],"4":[18,2,26,10],"gal1_mix":[10],"primit":[23],"reslic":[26],"els":[24],"save":[23,4,11,16],"set_width":[23,11,16],"momentum":[17,10],"spacepop":[17],"bin":[13,2],"applic":[17],"around":[18,11],"enzo2ddata":[26],"format":[4],"read":[26,18,2,4],"big":[13],"swig":[4],"piec":[17],"temperatur":[15,16,23,24,10,13,11],"grid":[14,17,24,18,10,26,20,13,4],"know":[24,18,17,26,11],"mip":[],"bit":[14,13,1],"cd":[2],"associ":[26,11],"licens":[17],"python2":[24,2],"insert":[26],"pure":[2],"d":[17,26],"specif":[17],"arbitrari":[26,4,15],"docutil":[],"seek":[2],"delaunai":[],"manual":[24,1,11],"zoom":[23,15],"integ":[17,26],"alamo":[2],"a5basenam":[],"pcolormesh":[13],"t":[24,18,17,11,20],"region":[14,18,10,26,20,13,4],"output":[17,4,16],"export_amira":[],"page":[5],"right":[24,18,17,4,10],"enzogridcollect":[26],"deal":[26,15],"creation":[17,23,20],"some":[14,17,23,1,10,24,18,2,20,13,4,11],"back":[26,13,4,18],"finestlevel":[4],"num_level":[26],"wxpython":[2],"export":[2,4],"act":[26,11],"toctre":[],"root":[24],"showmedo":[17],"guess":[10,26],"librari":[2],"basic":[5,18,26,14],"my_data0001_100kpc":[23],"slice":[14,15,23,18,10,26,20,4,11],"implement":[2,26],"find_sphere_grid":[4],"fourth":[],"support":[5,17],"enzoslicebas":[26],"definit":[24],"best":[17],"tracker":[17],"daunt":[14],"get_field_paramet":[26],"necessari":[5,2],"content":[5,17,14],"complic":[14,1,20],"refer":[],"be":[14,17,15,6,23,1,10,24,2,26,20,13,4],"plu":[20],"object":[5,15,14,17,24,18,10,26,20,13,4,11],"run":[5,2,6,16,0],"power":[26,21,20],"add_project":[15,11],"grouping_data":[],"usag":[2],"my_pair":[23],"_fraction":[20],"presuppos":[10],"left_edg":[26],"prerequisit":[5,2,24],"found":[17],"keeper":[17],"by":[15,17,10,24,18,2,26,13,4],"_":[24],"on":[5,17,15,16,14,23,10,18,2,26,20,13,4,21,11],"about":[5,17,18,10,20,4],"greatli":[2],"get_posit":[4],"transpos":[13],"freedom":[2],"cellmassmsun":[13],"datadir0036":[24],"enzoorthoraybas":[26],"currenttimeidentifi":[17],"simul":[4,16],"degre":[],"statement":[10],"includ":[26,11,16,20],"neighbor":[26],"basedatatyp":[],"fals":[17],"discard":[26],"processor":[15],"block":[11],"routin":[5,0,6],"feed":[13,10,18,11],"doubl":[17],"effici":[23],"primarili":[4],"h2":[13],"compil":[17],"basenam":[],"float":[26,4],"encod":[23],"bound":[13],"automat":[26,15,11,20],"three":[26,20],"down":[26,4],"strip":[4],"ensur":[23],"chang":[13,2,26,17],"abel":[2],"child_mask":[4],"storag":[2],"your":[24,17,2,18,20],"cutting_plan":[10],"often":[18,2,16],"span":[],"weight":[13,26,15],"val":[26],"execut":[2],"there":[5,15,17,1,10,26,20,13,11],"question":[18],"primari":[2,26],"fast":[2,20],"why":[5,17],"avail":[15,17,10,26,20,2],"remaind":[26],"reli":[2],"lago":[5,17,16,23,8,24,18,26,20,13,4],"interfac":[2,4,11,10],"inner":[23],"fraction":[13],"get_box_grid":[4],"print_stat":[4,16],"strict":[20],"analysi":[5,17,2,8,16],"ghost":[26,20],"footwork":[23],"an":[5,17,15,23,10,24,18,2,26,20,13,4],"add_threephase_spher":[11],"unexpect":[],"enough":[18],"tupl":[24,26],"subscrib":[17],"keyerror":[26],"but":[17,23,1,24,18,2,26,20,13,11],"taken":[17],"hi":[],"own":[18,20],"lcoal":[2],"eas":[2],"mitig":[2],"true":[26,13,4],"bug":[17],"faster":[13],"info":[18],"commun":[17],"throw":[26,4],"made":[17,26],"fortran":[5,0,6],"input":[26],"consist":[23,2],"stanford":[2],"default":[24,17,26,11],"autoclass":[],"tab":[16],"maximum":[24,4],"us":[5,15,6,14,7,17,10,24,18,2,26,20,4],"lead":[17,2,1],"record":[17],"plotcollect":[23,11,16],"bonus":[4],"sum":[26],"otherwis":[26,4],"problem":[17,15,10],"z":[18,17,4],"initialize_enzo_interfac":[],"connect":[26],"basic_objet":[],"gone":[5,17],"6":[],"featur":[2],"ad":[14,4,11],"_densiti":[20],"up":[5,17,10,24,2,26,20],"int":[4],"obtus":[1],"dure":[2,16,10],"interpolate_discret":[26],"am":[2],"doesn":[],"repres":[17,26],"extractedregionbas":[26],"as":[14,15,16,17,10,24,18,2,26,20,4,11],"ar":[5,17,15,23,10,24,18,2,26,20,13,21,11],"binnedprofile1d":[13],"at":[17,23,1,10,24,2,26,13,4],"file":[5,17,15,6,23,24,18,2,11,4,22],"home":[2],"request":[20],"ax":[18,17,11],"find_slice_grid":[4],"proport":[26],"happen":[20],"probabl":[17],"incorrect":[17],"again":[13],"profil":[5,13,10,11,14],"collid":[10],"want":[24,18,10,13,4,11],"no":[26,2,4],"find_min":[4],"47":[],"get_data":[26,4],"when":[10,2,11,20],"idiom":[23],"prism":[18,26],"book":[17],"5":[24,13,2,18,10],"futur":[17],"varieti":[15],"test":[18],"you":[17,15,23,1,10,24,18,2,20,13,4,21,11],"mock":[26],"10":[18,23,16],"node":[4,15],"draw":[26],"ll":[14,13],"star":[4],"findmax":[4],"affili":[4],"knew":[17],"enzoregion":[26],"m":[24],"densiti":[16,23,24,18,10,26,20,13,11],"increas":[2],"class":[26,4],"meaning":[17],"scale":[26,4],"log":[13,17],"consid":[23,26],"intepret":[14],"au":[23,11,16],"reduc":[2,26],"receiv":[10],"sphinx":[],"for":[5,17,15,16,23,10,24,18,2,26,20,13,4,11],"algorithm":[2],"scientif":[17],"directori":[2],"suit":[17],"lot":[17,1,11,20],"find_ray_grid":[4],"discrimin":[],"write":[3,17,6,5],"u":[23,16],"time":[15,17,1,2,4,11],"alright":[13],"fieldinfo":[18,20],"2008":[],"cookbook":[5,1],"fields_to_plot":[16]}]
\ No newline at end of file

Modified: trunk/doc/source/cookbook/index.rst
==============================================================================
--- trunk/doc/source/cookbook/index.rst	(original)
+++ trunk/doc/source/cookbook/index.rst	Wed Jun  4 12:19:41 2008
@@ -0,0 +1,20 @@
+Cookbook
+========
+
+yt scripts can be a bit intimidating, and at times a bit obtuse.  But there's a
+lot you can do, and this section of the manual will assist with figuring out
+how to do some fairly common tasks -- which can lead to combining these, with
+other Python code, into more complicated and advanced tasks.
+
+.. note::
+   All of these scripts assume that you have imported the standard yt modules.
+
+.. toctree::
+   :maxdepth: 2
+
+   making_simple_plots
+   analyzing_data
+   grouping_data
+   making_movies
+   making_timeseries_plots
+   extracting_data

Modified: trunk/doc/source/extending/creating_derived_fields.rst
==============================================================================
--- trunk/doc/source/extending/creating_derived_fields.rst	(original)
+++ trunk/doc/source/extending/creating_derived_fields.rst	Wed Jun  4 12:19:41 2008
@@ -1,2 +1,4 @@
 Creating Derived Fields
 =======================
+
+Derived fields are one of the more powerful ways in which you can extend yt.

Modified: trunk/epydoc.cfg
==============================================================================
--- trunk/epydoc.cfg	(original)
+++ trunk/epydoc.cfg	Wed Jun  4 12:19:41 2008
@@ -10,7 +10,7 @@
 output: html
 
 # The path to the output directory.  May be relative or absolute.
-target: /u/ki/mturk/public_html/doc/html/
+target: html/
 
 # An integer indicating how verbose epydoc should be.  The default
 # value is 0; negative values will supress warnings and errors;
@@ -125,7 +125,7 @@
 
 # The path to the Graphviz "dot" executable, used to generate
 # graphs.
-dotpath: /usr/work/mturk/local/bin/dot
+#dotpath: /usr/work/mturk/local/bin/dot
 
 # The name of one or more pstat files (generated by the profile
 # or hotshot module).  These are used to generate call graphs.

Modified: trunk/yt/arraytypes.py
==============================================================================
--- trunk/yt/arraytypes.py	(original)
+++ trunk/yt/arraytypes.py	Wed Jun  4 12:19:41 2008
@@ -30,13 +30,6 @@
 
 import numpy as na
 import numpy.core.records as rec
-try:
-    import scipy.ndimage as nd # Moved into scipy
-    import scipy as sp
-    import scipy.weave as weave
-    from scipy.weave import converters
-except ImportError:
-    pass
 
 # Now define convenience functions
 

