<div dir="ltr">+1</div><div class="gmail_extra"><br><br><div class="gmail_quote">On Thu, May 23, 2013 at 12:54 PM, Britton Smith <span dir="ltr"><<a href="mailto:brittonsmith@gmail.com" target="_blank">brittonsmith@gmail.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Hi Matt,<br><div><br></div><div>I think so, yes. Dark_Matter_Density as named exactly like that is an Enzo field that was written directly to disk by Enzo and includes star particles. It should be identical in value to particle_density, but it's probably better to use particle_density as it would be less confusing.<span class="HOEnZb"><font color="#888888"><br>
<br></font></span></div><span class="HOEnZb"><font color="#888888"><div>Britton<br></div></font></span></div><div class="HOEnZb"><div class="h5"><div class="gmail_extra"><br><br><div class="gmail_quote">On Thu, May 23, 2013 at 3:47 PM, Matthew Turk <span dir="ltr"><<a href="mailto:matthewturk@gmail.com" target="_blank">matthewturk@gmail.com</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Hi Britton,<br>
<br>
In that case, wouldn't it make sense instead of using<br>
Dark_Matter_Density, to use the full particle density, which is<br>
particle_density ? That would also (for instance) include star<br>
particles.<br>
<br>
-Matt<br>
<div><div><br>
On Thu, May 23, 2013 at 3:26 PM, Britton Smith <<a href="mailto:brittonsmith@gmail.com" target="_blank">brittonsmith@gmail.com</a>> wrote:<br>
> Ok, I see what the issue is. The ActualOverdensity field, which is used to<br>
> calculate virial quantities, requires the TotalMassMsun field, which adds<br>
> the density and dark_mater_densities. So, yeah, the Dark_Matter_Density<br>
> field is getting used there.<br>
><br>
><br>
> On Thu, May 23, 2013 at 2:57 PM, Matthew Turk <<a href="mailto:matthewturk@gmail.com" target="_blank">matthewturk@gmail.com</a>> wrote:<br>
>><br>
>> Hi Britton and Cameron,<br>
>><br>
>> Okay, perhaps a D_M_D that's universal is the way to go. Here's the<br>
>> script that threw the D_M_D error on a FLASH dataset:<br>
>><br>
>> <a href="http://paste.yt-project.org/show/3499/" target="_blank">http://paste.yt-project.org/show/3499/</a><br>
>><br>
>> Does this call upon standard_fields at all? Or is there somewhere<br>
>> else it might, perhaps in ActualOverdensity?<br>
>><br>
>> -Matt<br>
>><br>
>> On Thu, May 23, 2013 at 2:49 PM, Britton Smith <<a href="mailto:brittonsmith@gmail.com" target="_blank">brittonsmith@gmail.com</a>><br>
>> wrote:<br>
>> > I like defining a new yt field that is dark matter density for all<br>
>> > frontends. I also think it would be a good idea to be checking against<br>
>> > the<br>
>> > available field list when adding fields since dark matter density is<br>
>> > just<br>
>> > one of many fields that may only be defined by one of a few codes. I'm<br>
>> > curious to know if anyone is using the standard_fields defined in the<br>
>> > HaloProfiler. This was an attempt to recreate the functionality of an<br>
>> > old<br>
>> > Enzo radial profiling tool called enzo_anyl that never really got<br>
>> > finished.<br>
>> > Is this being used now? If so, I'd be interested to know how and how we<br>
>> > can<br>
>> > make it more usable.<br>
>> ><br>
>> > Britton<br>
>> ><br>
>> ><br>
>> > On Thu, May 23, 2013 at 1:53 PM, Cameron Hummels <<a href="mailto:chummels@gmail.com" target="_blank">chummels@gmail.com</a>><br>
>> > wrote:<br>
>> >><br>
>> >> I'd be inclined to change the field we examine from Dark_Matter_Density<br>
>> >> to<br>
>> >> a different field that is defined by yt. It's easier than creating a<br>
>> >> Dark_Matter_Density for each frontend.<br>
>> >><br>
>> >> Cameron<br>
>> >><br>
>> >><br>
>> >> On Thu, May 23, 2013 at 10:26 AM, Matthew Turk <<a href="mailto:matthewturk@gmail.com" target="_blank">matthewturk@gmail.com</a>><br>
>> >> wrote:<br>
>> >>><br>
>> >>> Hi all,<br>
>> >>><br>
>> >>> This came up after a discussion on #yt; I've CC'd the person who<br>
>> >>> brought this up.<br>
>> >>><br>
>> >>> In the halo profiler, there's a list of standard fields. In this we<br>
>> >>> have Dark_Matter_Density, which to my understanding is an<br>
>> >>> Enzo-specific field. It's not the same as the CIC_Deposit3 (defined<br>
>> >>> in yt) field that does a similar thing, but it's very similar. I am<br>
>> >>> wondering what the best way to handle this, particularly since any<br>
>> >>> frontend that wants to use the HaloProfiler will need this field<br>
>> >>> unless standard_fields is amended not to include it.<br>
>> >>><br>
>> >>> Should we:<br>
>> >>><br>
>> >>> * Define a Dark_Matter_Density for each frontend?<br>
>> >>> * Define a universal field that defines Dark_Matter_Density globally?<br>
>> >>> * Change the field we examine from Dark_Matter_Density to a different<br>
>> >>> field that is defined by yt, not assumed to be in the output file?<br>
>> >>> * Should we check if every standard_field is in the output<br>
>> >>> (pf.h.derived_field_list) before adding it?<br>
>> >>><br>
>> >>> Britton, I think you might have the best idea of how to fix this, but<br>
>> >>> Sam Leitner I know has been working on using Halo Profiler on other<br>
>> >>> datasets.<br>
>> >>><br>
>> >>> Thanks,<br>
>> >>><br>
>> >>> Matt<br>
>> >>><br>
>> >>> PS Please hit "reply all" so that Meghann, who reported this in #yt,<br>
>> >>> sees the response.<br>
>> >>> _______________________________________________<br>
>> >>> yt-dev mailing list<br>
>> >>> <a href="mailto:yt-dev@lists.spacepope.org" target="_blank">yt-dev@lists.spacepope.org</a><br>
>> >>> <a href="http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org</a><br>
>> >><br>
>> >><br>
>> >><br>
>> >><br>
>> >> --<br>
>> >> Cameron Hummels<br>
>> >> Postdoctoral Researcher<br>
>> >> Steward Observatory<br>
>> >> University of Arizona<br>
>> >> <a href="http://chummels.org" target="_blank">http://chummels.org</a><br>
>> >><br>
>> >> _______________________________________________<br>
>> >> yt-dev mailing list<br>
>> >> <a href="mailto:yt-dev@lists.spacepope.org" target="_blank">yt-dev@lists.spacepope.org</a><br>
>> >> <a href="http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org</a><br>
>> >><br>
>> ><br>
>> ><br>
>> > _______________________________________________<br>
>> > yt-dev mailing list<br>
>> > <a href="mailto:yt-dev@lists.spacepope.org" target="_blank">yt-dev@lists.spacepope.org</a><br>
>> > <a href="http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org</a><br>
>> ><br>
>> _______________________________________________<br>
>> yt-dev mailing list<br>
>> <a href="mailto:yt-dev@lists.spacepope.org" target="_blank">yt-dev@lists.spacepope.org</a><br>
>> <a href="http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org</a><br>
><br>
><br>
><br>
> _______________________________________________<br>
> yt-dev mailing list<br>
> <a href="mailto:yt-dev@lists.spacepope.org" target="_blank">yt-dev@lists.spacepope.org</a><br>
> <a href="http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org</a><br>
><br>
_______________________________________________<br>
yt-dev mailing list<br>
<a href="mailto:yt-dev@lists.spacepope.org" target="_blank">yt-dev@lists.spacepope.org</a><br>
<a href="http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org</a><br>
</div></div></blockquote></div><br></div>
</div></div><br>_______________________________________________<br>
yt-dev mailing list<br>
<a href="mailto:yt-dev@lists.spacepope.org">yt-dev@lists.spacepope.org</a><br>
<a href="http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org" target="_blank">http://lists.spacepope.org/listinfo.cgi/yt-dev-spacepope.org</a><br>
<br></blockquote></div><br><br clear="all"><div><br></div>-- <br>Cameron Hummels<div>Postdoctoral Researcher</div><div>Steward Observatory</div><div>University of Arizona</div><div><a href="http://chummels.org" target="_blank">http://chummels.org</a></div>
</div>