[yt-dev] Call for testing: updated install script

Nathan Goldbaum nathan12343 at gmail.com
Thu Apr 14 06:02:39 PDT 2016


On Thursday, April 14, 2016, Britton Smith <brittonsmith at gmail.com> wrote:

> Hi Nathan,
>
> I ran the install_script on two cluster here.  Both succeeded.
> 1. Archer, a cray similar to Blue Waters:
> Linux eslogin007 3.0.101-0.46-default #1 SMP Wed Dec 17 11:04:10 UTC 2014
> (8356111) x86_64 x86_64 x86_64 GNU/Linux
> 2. Local cluster at the observatory:
> Linux head 3.2.0-4-amd64 #1 SMP Debian 3.2.68-1+deb7u4 x86_64 GNU/Linux
>
> I ran the test script on my laptop (OS X 10.10.5).  It looks like some of
> the configurations failed.  The output of the script is here:
> http://paste.yt-project.org/show/6420/
>
>
Hi Britton,

I honestly wouldn't expect inst_conda=0 to work properly on a Mac.
Unfortunately it's very hard to figure out exactly what's going wrong here
without being able to locally debug...

Nathan


> Britton
>
> On Wed, Apr 13, 2016 at 7:01 PM, Kenza Arraki <karraki at nmsu.edu
> <javascript:_e(%7B%7D,'cvml','karraki at nmsu.edu');>> wrote:
>
>> Hi Nathan,
>> I did the same on my local machine (Mac OS X 10.10.5).
>>
>> $ wget
>> https://bitbucket.org/ngoldbaum/yt/raw/install-script-updates/doc/install_script.sh
>> $ bash install_script.sh
>>     using default settings
>>     edited path to add yt-conda/bin
>> $ conda run python
>>  > import yt
>>  > ds = yt.load('IsolatedGalaxy/galaxy0030/galaxy0030')
>>  > ds.print_stats()
>>
>> Looks good!
>>
>>
>> On Wed, Apr 13, 2016 at 11:45 AM David Collins <dcollins4096 at gmail.com
>> <javascript:_e(%7B%7D,'cvml','dcollins4096 at gmail.com');>> wrote:
>>
>>> Hi, Nathan--
>>>
>>> I did the simplest thing possible on Blue Waters and it seems to work.
>>> I haven't tried anything in parallel yet.
>>>
>>> module swap PrgEnv-cray PrgEnv-gnu
>>> module load hdf5
>>> (both in ~/.modules)
>>> got your script with wget
>>> % bash install_script.sh
>>>
>>> Ran in under 20 min.
>>>
>>> Thanks!
>>>
>>> d.
>>>
>>> On Wed, Apr 13, 2016 at 11:10 AM, Nathan Goldbaum <nathan12343 at gmail.com
>>> <javascript:_e(%7B%7D,'cvml','nathan12343 at gmail.com');>> wrote:
>>>
>>>> Hi all,
>>>>
>>>> I'd appreciate it if people could try running my updated install script
>>>> on a variety of platforms. With my changes, the install script sets up a
>>>> conda environment by default, but the option to create a bootstrapped
>>>> from-source python environment is still implemented. See PR 2009 for
>>>> details:
>>>>
>>>> https://bitbucket.org/yt_analysis/yt/pull-requests/2009
>>>>
>>>> You can either grab the raw install_script.sh file from my fork:
>>>>
>>>> $ wget
>>>> https://bitbucket.org/ngoldbaum/yt/raw/install-script-updates/doc/install_script.sh
>>>>
>>>> Or pull from my fork and run the "test_install_script.py" that I've
>>>> added. The latter will take a while, because it runs the install script six
>>>> times with a variety of permutations in options.
>>>>
>>>> Thanks for your help!
>>>>
>>>> -Nathan
>>>>
>>>> _______________________________________________
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>>>>
>>>>
>>>
>>>
>>> --
>>> -- Sent from a computer.
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>>
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>
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