[yt-dev] Issue #909: calculate_isocontour_flux function raises error in parallel analysis interface (yt_analysis/yt)
Nathan Goldbaum
issues-reply at bitbucket.org
Wed Sep 24 11:40:01 PDT 2014
New issue 909: calculate_isocontour_flux function raises error in parallel analysis interface
https://bitbucket.org/yt_analysis/yt/issue/909/calculate_isocontour_flux-function-raises
Nathan Goldbaum:
The following test script:
```
import yt
ds = yt.load('IsolatedGalaxy/galaxy0030/galaxy0030')
dd = ds.all_data()
dd.calculate_isocontour_flux('density', 1e-23, 'x-velocity', 'y-velocity', 'z-velocity', 'density')
```
raises the following error:
```
#!python
AttributeError Traceback (most recent call last)
/home/goldbaum/Documents/yt-hg/yt/mods.pyc in <module>()
----> 1 dd.calculate_isocontour_flux('density', 1e-23, 'x-velocity', 'y-velocity', 'z-velocity', 'density')
/home/goldbaum/Documents/yt-hg/yt/data_objects/data_containers.pyc in calculate_isocontour_flux(self, field, value, field_x, field_y, field_z, fluxing_field)
1106 """
1107 flux = 0.0
-> 1108 for g in self._get_grid_objs():
1109 flux += self._calculate_flux_in_grid(g, field, value,
1110 field_x, field_y, field_z, fluxing_field)
/home/goldbaum/Documents/yt-hg/yt/utilities/parallel_tools/parallel_analysis_interface.pyc in _get_grid_objs(self)
1065 if self._distributed:
1066 return ParallelObjectIterator(self, True, attr='_grids')
-> 1067 return ObjectIterator(self, True, attr='_grids')
1068
1069 def get_dependencies(self, fields):
/home/goldbaum/Documents/yt-hg/yt/utilities/parallel_tools/parallel_analysis_interface.pyc in __init__(self, pobj, just_list, attr)
146 gs = getattr(pobj, attr)
147 else:
--> 148 gs = getattr(pobj._data_source, attr)
149 if len(gs) == 0:
150 raise YTNoDataInObjectError(pobj)
AttributeError: 'YTRegion' object has no attribute '_data_source'
```
I think the parallel analysis interface should be using the chunking system here, but I'm not sure. I also a little mystified why the unit tests for this function didn't pick this up.
Responsible: MatthewTurk
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