[yt-dev] Fw: Re: [numfocus] Community build service (starting with Windows)

j s oishi jsoishi at gmail.com
Thu Nov 14 09:12:33 PST 2013


I am very, very interested in this discussion, but I am an absolute
neophyte when it comes to build systems, installing, and so on. Is there a
good primer on these issues that I could look at?

j


On Thu, Nov 14, 2013 at 11:59 AM, Anthony Scopatz <scopatz at gmail.com> wrote:

> Thanks for fwding this along Nathan.
> On Nov 14, 2013 3:25 AM, "Nathan Goldbaum" <nathan12343 at gmail.com> wrote:
>
>> There is a very interesting conversation going on over on the numfocus
>> list about a distributed build service for the numfocus ecosystem:
>> https://groups.google.com/forum/#!topic/numfocus/mVNakFqfpZg
>>
>> I’m forwarding this message from Anthony since he mentions yt.  I’m
>> hopeful that in the end this discussion leads to something concrete and
>> useful for our users.
>>
>> On November 14, 2013 at 12:16:44 AM, Anthony Scopatz (scopatz at gmail.com<//scopatz at gmail.com>)
>> wrote:
>>
>> Hello All,
>>
>> I'd like to volunteer to be the person to spearhead this effort, or at
>> least be the manager/organizer of this effort. Normally I wouldn't do this
>> (I have enough on my plate) but the build and distribution problems have
>> become *the* central issue for PyNE <http://pynesim.org/> in the past 10
>> days [1]. On Monday Nov. 4th, Katy hosted a PyNE workshop at UC Berkeley.
>>  Out of the ~15 attendees, 2 could successfully install PyNE...even using
>> anaconda and/or canopy and ignoring our optional dependencies. *We
>> absolutely have to solve this problem for the project to survive.* The
>> PyNE stack fairly standard for this community.  The fact that we have had
>> such terrible install problems is really a serious issue.  We are going to
>> dedicate the next release to fixing this problem *rather than* doing any
>> nuclear engineering.
>>
>> Furthermore, I don't think that this is a wholly unique situation as I
>> know other codes, such as yt, have experienced similar difficulties in this
>> space.
>>
>> I believe that to fix this problem sufficiently we must have empathy for
>> our users, rather than for ourselves as developers.  We need to be open to
>> installing packages in the way the user is comfortable with even though it
>> may make more work for us.
>>
>> Many of the problems I feel stem from wanting to support a public API for
>> many languages simultaneously (C/C++/Python/Fortran).  PyNE is not unique
>> in this way.  NumPy also does this.  However, the dependency pool for PyNE
>> is much broader and deeper than for NumPy.  Additionally as Aaron brings
>> up, we aren't really just talking about supporting Python & Cython code.
>>  By virtue of our dependencies, we also have to support packages in these
>> compiled libraries.
>>
>> I have many ideas about how to go about this process, though it will
>> require help from many people.  I believe all of the pieces are there to do
>> this right, but what we need is a coordinated strategy, someone to carve up
>> tasks appropriately, and someone to make sure that this process doesn't
>> take too long.  Again, I am happy to be the cat-wrangler, if for no other
>> reason than that PyNE will be going through this shortly.
>>
>> Travis-ci, vms, etc, have come up quite a bit so far on this thread.  As
>> others have noted, this is the right idea but insufficiently executed.
>>  Therefore, I'd like to direct folks to the Build & Test Lab (BaTLab)<https://www.batlab.org/>.
>> This is an NSF funded organization whose purpose it is to provide an
>> integrated suite of platforms <https://www.batlab.org/?q=platforms> for
>> building and testing scientific software.  Even though it is at UW-Madison,
>> it is open to everyone and free to use.  The advantage here is that BaTLab
>> jobs can take as long as they need to and it already supports the platforms
>> we need in many flavors: Windows, Mac, Linux.  For another project
>> (cyclus), I am working on a little web app<https://github.com/cyclus/polyphemus>which exposes Travis-CI-like functionality but is backended by BaTLab.
>>  Hopefully this will be in a working state by this weekend.  *Basically,
>> there is no need for us to build the infrastructure!* Or at lease no
>> need to do so in the short- to medium-term.
>>
>> I think if every project were able to donate a person or two to work on
>> this for the next month we really could get something working that truly
>> addressed or routed around some of the fundamental flaws with the current
>> system.
>>
>> In summary, we (PyNE +/- yt) can run off and solve this for ourselves
>> -OR- we (NumFOCUS) can help pool our resources and try to create a quality
>> solution that applies to everyone.  Sorry if this is a bit ranty, but it
>> has become difficult for me to sell Python & PyNE because of building and
>> distribution.  This is long overdue and I am willing to put my money where
>> my mouth is.  If someone has better ideas, I'd love to hear them!
>>
>> Be Well
>> Anthony
>>
>> 1. https://groups.google.com/d/topic/pyne-dev/RxNCHvZAAEQ/discussion
>>
>>
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