[yt-dev] Issue #581: Source install error from fKDpy (yt_analysis/yt)

[Casey W. Stark]

Should I close the issue or leave it open until this is pulled into 3.0?


On Wed, May 29, 2013 at 2:39 PM, Nathan Goldbaum <nathan12343 at gmail.com>wrote:

> I left a comment on the bitbucket issue - the bug is fixed in 2.X but not
> fixed in 3.0.
>
> On May 29, 2013, at 2:36 PM, Anthony Scopatz <scopatz at gmail.com> wrote:
>
> Hello All,
>
> I have seen this issue before, but I forget what fixed it.  What version
> of Python are you using?  Module shared objects get different names in
> Python 3.  This file would be called something like fKDpy.cpython.so<http://fkdpy.cpython.so/>instead, which is why setup.py would not find it.  Try a clean rebuild
> using Python 2.
>
> Be Well
> Anthony
>
>
> On Wed, May 29, 2013 at 4:25 PM, Casey Stark <issues-reply at bitbucket.org>wrote:
>
>> New issue 581: Source install error from fKDpy
>>
>> https://bitbucket.org/yt_analysis/yt/issue/581/source-install-error-from-fkdpy
>>
>> Casey Stark:
>>
>> I'm installing yt-3.0 on NERSC's hopper following the instructions on
>> http://www.nersc.gov/users/software/development-tools/python-tools/. The
>> install fails because the setup script first decides not to build fKDpy.so,
>> but then later tries to copy it to the build directory. Here are the pieces
>> of the log:
>>
>> ```
>> $ python setup.py install --home=~/python_modules/hopper
>> PNG_LOCATION: png found in: /usr/include, /usr/lib
>> FTYPE_LOCATION: freetype found in: /usr/include, /usr/lib
>> HDF5_LOCATION: HDF5_DIR: /opt/cray/hdf5/1.8.8/gnu/47/include,
>> /opt/cray/hdf5/1.8.8/gnu/47/lib
>> running install
>> running bdist_egg
>> running egg_info
>> running build_src
>> running build_forthon
>> fKDpy.so won't be built due to missing Forthon/gfortran
>> build_src
>> ...
>> running install_data
>> error: can't copy 'yt/utilities/kdtree/fKDpy.so': doesn't exist or not a
>> regular file
>> ```
>>
>> Am I missing something here?
>>
>>
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>>
>
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