[yt-dev] Boxlib changes: RFT

Matthew Turk matthewturk at gmail.com
Wed Sep 26 10:04:04 PDT 2012


Hi Casey,

Ah, I saw this the other day when we were IO stress testing on EC2. It's a
super simple fix of switching from int to int64 in the Cython IO code; I
will push it today. For some reason I thought I already had! Thanks for the
heads up.

Matt
On Sep 26, 2012 12:24 PM, "Casey W. Stark" <caseywstark at gmail.com> wrote:

> Hey Matt.
>
> I installed yt-dev on Hopper and updated to Andrew's changes. The
> cellvolume test looks good, so the changes are good.
>
> However, this brought up another issue with the Nyx reader. When I tried
> projecting in a 2.4 install and the fresh install, I got "OverflowError:
> value too large to convert to int" from calling read_and_seek. We should
> sort this out, but because it's in both versions, I don't think it has to
> do with these changes.
>
> - Casey
>
>
> On Thu, Sep 20, 2012 at 4:00 PM, Matthew Turk <matthewturk at gmail.com>wrote:
>
>> Hi Casey,
>>
>> I think your and Andrew's intutions are correct.  Another good sanity
>> check would be to check the before/after values of calculating:
>>
>> dd = pf.h.all_data()
>> dd.quantities["TotalQuantity"]("CellVolume")
>>
>> I think as long as this is the sae, and the slices are all set, it
>> should be all good.  The changes I think are quite good and should
>> only change (by helping) at the level of just above roundoff error.
>>
>> -Matt
>>
>> On Thu, Sep 20, 2012 at 6:49 PM, Andrew Myers <atmyers at berkeley.edu>
>> wrote:
>> > Hi Casey,
>> >
>> > Someone more knowledgeable than myself should confirm, but I would guess
>> > that if I screwed up something with the 'dx' fields it would be fairly
>> > blatant, such that a multi-level slice or projection would catch it.
>> I've
>> > been working with Orion data sets for about a week with this change,
>> and it
>> > seems fine, so I think we just need a basic sanity check for the other
>> > frontends.
>> >
>> > -Andrew Myers
>> >
>> >
>> > On Thu, Sep 20, 2012 at 3:13 PM, Casey W. Stark <caseywstark at gmail.com>
>> > wrote:
>> >>
>> >> Hey Matt.
>> >>
>> >> The changes in the Nyx frontend look good to me, but you're right that
>> >> I'll have to test it. Is it sufficient to compare multilevel slices
>> before
>> >> and after the changes?
>> >>
>> >> - Casey
>> >>
>> >>
>> >> On Thu, Sep 20, 2012 at 8:30 AM, Matthew Turk <matthewturk at gmail.com>
>> >> wrote:
>> >>>
>> >>> Hi all (but especially Casey and Tom Robitaille if he's still
>> subscribed
>> >>> :),
>> >>>
>> >>> Andrew Myers found a very nice solution to issue #414:
>> >>>
>> >>>
>> >>>
>> https://bitbucket.org/yt_analysis/yt/issue/414/orion-ghot-zones-not-generating-correctly
>> >>>
>> >>> which he's put in this PR:
>> >>>
>> >>>
>> >>>
>> https://bitbucket.org/yt_analysis/yt/pull-request/275/reading-in-dds-for-each-grid-from-the
>> >>>
>> >>> I have only limited access to Nyx / Orion data with subgrids, so I
>> >>> can't test this appropriately.  I think the changes look good,
>> >>> however, so if I can get from any other boxlib user that they still
>> >>> produce good results, I will accept them.  This is also a good time to
>> >>> mention that going forward I hope to consolidate the various boxlib
>> >>> readers.
>> >>>
>> >>> Best,
>> >>>
>> >>> Matt
>> >>> _______________________________________________
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>> >>
>> >>
>> >>
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